Gene : Thecc1EG007259 T. cacao v1.1
Defline:  (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  1150
Name:  ? Thecc1EG007259 Secondary Identifier:  ? PAC:27459670
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007259 0.5kb upstream 0.5kb upstream 14443 true scaffold_2: 6036650-6051092 Theobroma cacao
Thecc1EG007259 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6050593-6051092 Theobroma cacao
Thecc1EG007259 0.5kb downstream 0.5kb downstream 14443 true scaffold_2: 6036150-6050592 Theobroma cacao
Thecc1EG007259 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6036150-6036649 Theobroma cacao
Thecc1EG007259 1.0kb upstream 1.0kb upstream 14943 true scaffold_2: 6036650-6051592 Theobroma cacao
Thecc1EG007259 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6050593-6051592 Theobroma cacao
Thecc1EG007259 1.0kb downstream 1.0kb downstream 14943 true scaffold_2: 6035650-6050592 Theobroma cacao
Thecc1EG007259 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6035650-6036649 Theobroma cacao
Thecc1EG007259 2.0kb upstream 2.0kb upstream 15943 true scaffold_2: 6036650-6052592 Theobroma cacao
Thecc1EG007259 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6050593-6052592 Theobroma cacao
Thecc1EG007259 2.0kb downstream 2.0kb downstream 15943 true scaffold_2: 6034650-6050592 Theobroma cacao
Thecc1EG007259 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6034650-6036649 Theobroma cacao
Thecc1EG007259 5.0kb upstream 5.0kb upstream 18943 true scaffold_2: 6036650-6055592 Theobroma cacao
Thecc1EG007259 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6050593-6055592 Theobroma cacao
Thecc1EG007259 5.0kb downstream 5.0kb downstream 18943 true scaffold_2: 6031650-6050592 Theobroma cacao
Thecc1EG007259 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6031650-6036649 Theobroma cacao
Thecc1EG007259 10.0kb upstream 10.0kb upstream 23943 true scaffold_2: 6036650-6060592 Theobroma cacao
Thecc1EG007259 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6050593-6060592 Theobroma cacao
Thecc1EG007259 10.0kb downstream 10.0kb downstream 23943 true scaffold_2: 6026650-6050592 Theobroma cacao
Thecc1EG007259 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6026650-6036649 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840209 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain