Gene : AL3G33120 A. lyrata v2.1
Defline:  (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  2206
Name:  ? AL3G33120 Secondary Identifier:  ? PAC:35940677
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G33120 0.5kb upstream 0.5kb upstream 9694   true scaffold_3: 8503058-8512751 Arabidopsis lyrata
AL3G33120 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 8512252-8512751 Arabidopsis lyrata
AL3G33120 0.5kb downstream 0.5kb downstream 9694   true scaffold_3: 8502558-8512251 Arabidopsis lyrata
AL3G33120 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 8502558-8503057 Arabidopsis lyrata
AL3G33120 1.0kb upstream 1.0kb upstream 10194   true scaffold_3: 8503058-8513251 Arabidopsis lyrata
AL3G33120 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 8512252-8513251 Arabidopsis lyrata
AL3G33120 1.0kb downstream 1.0kb downstream 10194   true scaffold_3: 8502058-8512251 Arabidopsis lyrata
AL3G33120 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 8502058-8503057 Arabidopsis lyrata
AL3G33120 2.0kb upstream 2.0kb upstream 11194   true scaffold_3: 8503058-8514251 Arabidopsis lyrata
AL3G33120 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 8512252-8514251 Arabidopsis lyrata
AL3G33120 2.0kb downstream 2.0kb downstream 11194   true scaffold_3: 8501058-8512251 Arabidopsis lyrata
AL3G33120 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 8501058-8503057 Arabidopsis lyrata
AL3G33120 5.0kb upstream 5.0kb upstream 14194   true scaffold_3: 8503058-8517251 Arabidopsis lyrata
AL3G33120 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 8512252-8517251 Arabidopsis lyrata
AL3G33120 5.0kb downstream 5.0kb downstream 14194   true scaffold_3: 8498058-8512251 Arabidopsis lyrata
AL3G33120 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 8498058-8503057 Arabidopsis lyrata
AL3G33120 10.0kb upstream 10.0kb upstream 19194   true scaffold_3: 8503058-8522251 Arabidopsis lyrata
AL3G33120 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 8512252-8522251 Arabidopsis lyrata
AL3G33120 10.0kb downstream 10.0kb downstream 19194   true scaffold_3: 8493058-8512251 Arabidopsis lyrata
AL3G33120 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 8493058-8503057 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360518 5261 Brassicaceae View MSA
123840209 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain