Gene : AL1G52580 A. lyrata v2.1
Defline:  (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  3931
Name:  ? AL1G52580 Secondary Identifier:  ? PAC:35934083
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G52580 0.5kb upstream 0.5kb upstream 8085   true scaffold_1: 22922016-22930100 Arabidopsis lyrata
AL1G52580 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 22922016-22922515 Arabidopsis lyrata
AL1G52580 0.5kb downstream 0.5kb downstream 8085   true scaffold_1: 22922516-22930600 Arabidopsis lyrata
AL1G52580 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 22930101-22930600 Arabidopsis lyrata
AL1G52580 1.0kb upstream 1.0kb upstream 8585   true scaffold_1: 22921516-22930100 Arabidopsis lyrata
AL1G52580 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 22921516-22922515 Arabidopsis lyrata
AL1G52580 1.0kb downstream 1.0kb downstream 8585   true scaffold_1: 22922516-22931100 Arabidopsis lyrata
AL1G52580 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 22930101-22931100 Arabidopsis lyrata
AL1G52580 2.0kb upstream 2.0kb upstream 9585   true scaffold_1: 22920516-22930100 Arabidopsis lyrata
AL1G52580 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 22920516-22922515 Arabidopsis lyrata
AL1G52580 2.0kb downstream 2.0kb downstream 9585   true scaffold_1: 22922516-22932100 Arabidopsis lyrata
AL1G52580 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 22930101-22932100 Arabidopsis lyrata
AL1G52580 5.0kb upstream 5.0kb upstream 12585   true scaffold_1: 22917516-22930100 Arabidopsis lyrata
AL1G52580 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 22917516-22922515 Arabidopsis lyrata
AL1G52580 5.0kb downstream 5.0kb downstream 12585   true scaffold_1: 22922516-22935100 Arabidopsis lyrata
AL1G52580 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 22930101-22935100 Arabidopsis lyrata
AL1G52580 10.0kb upstream 10.0kb upstream 17585   true scaffold_1: 22912516-22930100 Arabidopsis lyrata
AL1G52580 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 22912516-22922515 Arabidopsis lyrata
AL1G52580 10.0kb downstream 10.0kb downstream 17585   true scaffold_1: 22922516-22940100 Arabidopsis lyrata
AL1G52580 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 22930101-22940100 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369990 5261 Brassicaceae View MSA
123833261 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain