Gene : Carub.0003s1682 C. rubella v1.1
Defline:  (1 of 24) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED Genomic Order:  1682
Name:  ? Carub.0003s1682 Secondary Identifier:  ? PAC:39240111
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1682 0.5kb upstream 0.5kb upstream 1061 true scaffold_3: 5950636-5951696 Capsella rubella
Carub.0003s1682 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5950636-5951135 Capsella rubella
Carub.0003s1682 0.5kb downstream 0.5kb downstream 1061 true scaffold_3: 5951136-5952196 Capsella rubella
Carub.0003s1682 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5951697-5952196 Capsella rubella
Carub.0003s1682 1.0kb upstream 1.0kb upstream 1561 true scaffold_3: 5950136-5951696 Capsella rubella
Carub.0003s1682 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5950136-5951135 Capsella rubella
Carub.0003s1682 1.0kb downstream 1.0kb downstream 1561 true scaffold_3: 5951136-5952696 Capsella rubella
Carub.0003s1682 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5951697-5952696 Capsella rubella
Carub.0003s1682 2.0kb upstream 2.0kb upstream 2561 true scaffold_3: 5949136-5951696 Capsella rubella
Carub.0003s1682 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5949136-5951135 Capsella rubella
Carub.0003s1682 2.0kb downstream 2.0kb downstream 2561 true scaffold_3: 5951136-5953696 Capsella rubella
Carub.0003s1682 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5951697-5953696 Capsella rubella
Carub.0003s1682 5.0kb upstream 5.0kb upstream 5561 true scaffold_3: 5946136-5951696 Capsella rubella
Carub.0003s1682 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5946136-5951135 Capsella rubella
Carub.0003s1682 5.0kb downstream 5.0kb downstream 5561 true scaffold_3: 5951136-5956696 Capsella rubella
Carub.0003s1682 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5951697-5956696 Capsella rubella
Carub.0003s1682 10.0kb upstream 10.0kb upstream 10561 true scaffold_3: 5941136-5951696 Capsella rubella
Carub.0003s1682 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5941136-5951135 Capsella rubella
Carub.0003s1682 10.0kb downstream 10.0kb downstream 10561 true scaffold_3: 5951136-5961696 Capsella rubella
Carub.0003s1682 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5951697-5961696 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377464 5261 Brassicaceae View MSA
123841059 5264 Brassicales-Malvales View MSA
124350397 5266 SBM View MSA
124252720 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain