Gene : Carub.0003s2959 C. rubella v1.1
Defline:  (1 of 8) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  2959
Name:  ? Carub.0003s2959 Secondary Identifier:  ? PAC:39242844
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2959 0.5kb upstream 0.5kb upstream 1460 true scaffold_3: 12469207-12470666 Capsella rubella
Carub.0003s2959 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12470167-12470666 Capsella rubella
Carub.0003s2959 0.5kb downstream 0.5kb downstream 1460 true scaffold_3: 12468707-12470166 Capsella rubella
Carub.0003s2959 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12468707-12469206 Capsella rubella
Carub.0003s2959 1.0kb upstream 1.0kb upstream 1960 true scaffold_3: 12469207-12471166 Capsella rubella
Carub.0003s2959 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12470167-12471166 Capsella rubella
Carub.0003s2959 1.0kb downstream 1.0kb downstream 1960 true scaffold_3: 12468207-12470166 Capsella rubella
Carub.0003s2959 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12468207-12469206 Capsella rubella
Carub.0003s2959 2.0kb upstream 2.0kb upstream 2960 true scaffold_3: 12469207-12472166 Capsella rubella
Carub.0003s2959 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12470167-12472166 Capsella rubella
Carub.0003s2959 2.0kb downstream 2.0kb downstream 2960 true scaffold_3: 12467207-12470166 Capsella rubella
Carub.0003s2959 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12467207-12469206 Capsella rubella
Carub.0003s2959 5.0kb upstream 5.0kb upstream 5960 true scaffold_3: 12469207-12475166 Capsella rubella
Carub.0003s2959 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12470167-12475166 Capsella rubella
Carub.0003s2959 5.0kb downstream 5.0kb downstream 5960 true scaffold_3: 12464207-12470166 Capsella rubella
Carub.0003s2959 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12464207-12469206 Capsella rubella
Carub.0003s2959 10.0kb upstream 10.0kb upstream 10960 true scaffold_3: 12469207-12480166 Capsella rubella
Carub.0003s2959 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12470167-12480166 Capsella rubella
Carub.0003s2959 10.0kb downstream 10.0kb downstream 10960 true scaffold_3: 12459207-12470166 Capsella rubella
Carub.0003s2959 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12459207-12469206 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375502 5261 Brassicaceae View MSA
123835192 5264 Brassicales-Malvales View MSA
124337537 5266 SBM View MSA
124249741 5268 Malvidae View MSA
124067177 5270 Rosid View MSA
123751144 5271 Pentapetalae View MSA
122791968 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain