Gene : Carub.0003s0710 C. rubella v1.1

Defline:  (1 of 8) PF13516 - Leucine Rich repeat (LRR_6) Genomic Order:  710
Name:  ? Carub.0003s0710 Secondary Identifier:  ? PAC:39239813

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0710 0.5kb upstream 0.5kb upstream 1688 true scaffold_3: 2442321-2444008 Capsella rubella
Carub.0003s0710 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2442321-2442820 Capsella rubella
Carub.0003s0710 0.5kb downstream 0.5kb downstream 1688 true scaffold_3: 2442821-2444508 Capsella rubella
Carub.0003s0710 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2444009-2444508 Capsella rubella
Carub.0003s0710 1.0kb upstream 1.0kb upstream 2188 true scaffold_3: 2441821-2444008 Capsella rubella
Carub.0003s0710 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2441821-2442820 Capsella rubella
Carub.0003s0710 1.0kb downstream 1.0kb downstream 2188 true scaffold_3: 2442821-2445008 Capsella rubella
Carub.0003s0710 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2444009-2445008 Capsella rubella
Carub.0003s0710 2.0kb upstream 2.0kb upstream 3188 true scaffold_3: 2440821-2444008 Capsella rubella
Carub.0003s0710 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2440821-2442820 Capsella rubella
Carub.0003s0710 2.0kb downstream 2.0kb downstream 3188 true scaffold_3: 2442821-2446008 Capsella rubella
Carub.0003s0710 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2444009-2446008 Capsella rubella
Carub.0003s0710 5.0kb upstream 5.0kb upstream 6188 true scaffold_3: 2437821-2444008 Capsella rubella
Carub.0003s0710 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2437821-2442820 Capsella rubella
Carub.0003s0710 5.0kb downstream 5.0kb downstream 6188 true scaffold_3: 2442821-2449008 Capsella rubella
Carub.0003s0710 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2444009-2449008 Capsella rubella
Carub.0003s0710 10.0kb upstream 10.0kb upstream 11188 true scaffold_3: 2432821-2444008 Capsella rubella
Carub.0003s0710 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2432821-2442820 Capsella rubella
Carub.0003s0710 10.0kb downstream 10.0kb downstream 11188 true scaffold_3: 2442821-2454008 Capsella rubella
Carub.0003s0710 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2444009-2454008 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371205 5261 Brassicaceae View MSA
123832879 5264 Brassicales-Malvales View MSA
124338241 5266 SBM View MSA
124237914 5268 Malvidae View MSA
124072023 5270 Rosid View MSA
123753074 5271 Pentapetalae View MSA
122793383 5272 Eudicot View MSA
122050086 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121349716 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain