Protein Family : RNI-like superfamily protein 124237914

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  19

19 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30005.t000029 ubiquitin-protein ligase, putative R. communis v0.1 1387   30005: 173051-174437
orange1.1g016420m.g (1 of 1) PTHR23125:SF38 - GB DEF: F21O3.26 PROTEIN (HYPOTHETICAL PROTEIN AT3G07550/F21O3_26) (PUTATIVE F-BOX PROTE C. sinensis v1.1 2495   scaffold00192: 88309-90803
AT3G07550 (1 of 34) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box A. thaliana TAIR10 1818   Chr3: 2409477-2411294
Thhalv10020882m.g (1 of 12) PF13516 - Leucine Rich repeat (LRR_6) E. salsugineum v1.0 1565   scaffold_13: 6985976-6987540
Ciclev10015543m.g (1 of 1) PTHR23125:SF38 - GB DEF: F21O3.26 PROTEIN (HYPOTHETICAL PROTEIN AT3G07550/F21O3_26) (PUTATIVE F-BOX PROTE C. clementina v1.0 2511   scaffold_2: 25339916-25342426
Lus10041087.g (1 of 2) PTHR23125:SF38 - GB DEF: F21O3.26 PROTEIN (HYPOTHETICAL PROTEIN AT3G07550/F21O3_26) (PUTATIVE F-BOX PROTE L. usitatissimum v1.0 1122   scaffold280: 910590-911711
Lus10036412.g (1 of 2) PTHR23125:SF38 - GB DEF: F21O3.26 PROTEIN (HYPOTHETICAL PROTEIN AT3G07550/F21O3_26) (PUTATIVE F-BOX PROTE L. usitatissimum v1.0 1122   scaffold57: 537343-538464
Gorai.007G162000 (1 of 5) KOG2120 - SCF ubiquitin ligase, Skp2 component G. raimondii v2.1 2424   Chr07: 14159937-14162360
Thecc1EG002569 (1 of 31) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box T. cacao v1.1 2681   scaffold_1: 14900488-14903168
Araha.4706s0024 (1 of 10) PF13516 - Leucine Rich repeat (LRR_6) A. halleri v1.1 1161   Scaffold4706: 74676-75836
Cagra.0133s0099 (1 of 9) PF13516 - Leucine Rich repeat (LRR_6) C. grandiflora v1.1 2028   Scaffold133: 371772-373799
Brara.E03196 (1 of 14) PF13516 - Leucine Rich repeat (LRR_6) B. rapa FPsc v1.3 2713   A05: 26079027-26081739
Bostr.22252s0275 (1 of 1) PTHR23125:SF38 - GB DEF: F21O3.26 PROTEIN (HYPOTHETICAL PROTEIN AT3G07550/F21O3_26) (PUTATIVE F-BOX PROTE B. stricta v1.2 1185   Scaffold22252: 1200817-1202001
SapurV1A.0412s0140 F-box/LRR protein S. purpurea v1.0 3219   chr17: 4936790-4940008
Manes.13G057500 (1 of 1) PTHR23125:SF38 - GB DEF: F21O3.26 PROTEIN (HYPOTHETICAL PROTEIN AT3G07550/F21O3_26) (PUTATIVE F-BOX PROTE M. esculenta v6.1 1170   Chromosome13: 6209606-6210775
AL3G18890   A. lyrata v2.1 1829   scaffold_3: 3182285-3184113
Potri.017G056400 F-box family protein; similar to F-box protein FBL6 GI:6456737 from (Homo sapiens); F-box family protein; similar to F-box protein FBL6 GI:6456737 from (Homo sapiens); [ ortholog of At3g07550,] P. trichocarpa v3.1 2961   Chr17: 5035591-5038551
Podel.17G058700   P. deltoides WV94 v2.1 3172   Chr17: 5121894-5125065
Carub.0003s0710 (1 of 8) PF13516 - Leucine Rich repeat (LRR_6) C. rubella v1.1 1188   scaffold_3: 2442821-2444008

19 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g016420m C. sinensis v1.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Lus10036412 L. usitatissimum v1.0 124237914 RNI-like superfamily protein 2 5268 Malvidae
AL3G18890.t1 A. lyrata v2.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
30005.m001263 R. communis v0.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
AT3G07550.1 A. thaliana TAIR10 124237914 RNI-like superfamily protein 1 5268 Malvidae
Thhalv10020882m E. salsugineum v1.0 124237914 RNI-like superfamily protein 1 5268 Malvidae
Ciclev10015543m C. clementina v1.0 124237914 RNI-like superfamily protein 1 5268 Malvidae
Lus10041087 L. usitatissimum v1.0 124237914 RNI-like superfamily protein 2 5268 Malvidae
Gorai.007G162000.1 G. raimondii v2.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Thecc1EG002569t1 T. cacao v1.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Araha.4706s0024.1.p A. halleri v1.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Cagra.0133s0099.1.p C. grandiflora v1.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Brara.E03196.1.p B. rapa FPsc v1.3 124237914 RNI-like superfamily protein 1 5268 Malvidae
Bostr.22252s0275.1.p B. stricta v1.2 124237914 RNI-like superfamily protein 1 5268 Malvidae
SapurV1A.0412s0140.1.p S. purpurea v1.0 124237914 RNI-like superfamily protein 1 5268 Malvidae
Manes.13G057500.1.p M. esculenta v6.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Potri.017G056400.1.p P. trichocarpa v3.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Podel.17G058700.1.p P. deltoides WV94 v2.1 124237914 RNI-like superfamily protein 1 5268 Malvidae
Carub.0003s0710.1.p C. rubella v1.1 124237914 RNI-like superfamily protein 1 5268 Malvidae