Gene : AT3G07550 A. thaliana TAIR10
Defline:  (1 of 34) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  745
Name:  ? AT3G07550 Secondary Identifier:  ? PAC:19664032
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07550 0.5kb upstream 0.5kb upstream 2318 true Chr3: 2408977-2411294 Arabidopsis thaliana
AT3G07550 0.5kb upstream 0.5kb upstream 500 false Chr3: 2408977-2409476 Arabidopsis thaliana
AT3G07550 0.5kb downstream 0.5kb downstream 2318 true Chr3: 2409477-2411794 Arabidopsis thaliana
AT3G07550 0.5kb downstream 0.5kb downstream 500 false Chr3: 2411295-2411794 Arabidopsis thaliana
AT3G07550 1.0kb upstream 1.0kb upstream 2818 true Chr3: 2408477-2411294 Arabidopsis thaliana
AT3G07550 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2408477-2409476 Arabidopsis thaliana
AT3G07550 1.0kb downstream 1.0kb downstream 2818 true Chr3: 2409477-2412294 Arabidopsis thaliana
AT3G07550 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2411295-2412294 Arabidopsis thaliana
AT3G07550 2.0kb upstream 2.0kb upstream 3818 true Chr3: 2407477-2411294 Arabidopsis thaliana
AT3G07550 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2407477-2409476 Arabidopsis thaliana
AT3G07550 2.0kb downstream 2.0kb downstream 3818 true Chr3: 2409477-2413294 Arabidopsis thaliana
AT3G07550 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2411295-2413294 Arabidopsis thaliana
AT3G07550 5.0kb upstream 5.0kb upstream 6818 true Chr3: 2404477-2411294 Arabidopsis thaliana
AT3G07550 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2404477-2409476 Arabidopsis thaliana
AT3G07550 5.0kb downstream 5.0kb downstream 6818 true Chr3: 2409477-2416294 Arabidopsis thaliana
AT3G07550 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2411295-2416294 Arabidopsis thaliana
AT3G07550 10.0kb upstream 10.0kb upstream 11818 true Chr3: 2399477-2411294 Arabidopsis thaliana
AT3G07550 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2399477-2409476 Arabidopsis thaliana
AT3G07550 10.0kb downstream 10.0kb downstream 11818 true Chr3: 2409477-2421294 Arabidopsis thaliana
AT3G07550 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2411295-2421294 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371205 5261 Brassicaceae View MSA
123832879 5264 Brassicales-Malvales View MSA
124338241 5266 SBM View MSA
124237914 5268 Malvidae View MSA
124072023 5270 Rosid View MSA
123753074 5271 Pentapetalae View MSA
122793383 5272 Eudicot View MSA
122050086 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121349716 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.025        
cufflinks 4.815        
cufflinks 3.376       Low
cufflinks 4.751        
cufflinks 3.595       Low
cufflinks 5.019        

0 Strain