Gene : Carub.0003s0719 C. rubella v1.1

Defline:  (1 of 3) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE Genomic Order:  719
Name:  ? Carub.0003s0719 Secondary Identifier:  ? PAC:39239291

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0719 0.5kb upstream 0.5kb upstream 5815 true scaffold_3: 2467033-2472847 Capsella rubella
Carub.0003s0719 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2467033-2467532 Capsella rubella
Carub.0003s0719 0.5kb downstream 0.5kb downstream 5815 true scaffold_3: 2467533-2473347 Capsella rubella
Carub.0003s0719 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2472848-2473347 Capsella rubella
Carub.0003s0719 1.0kb upstream 1.0kb upstream 6315 true scaffold_3: 2466533-2472847 Capsella rubella
Carub.0003s0719 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2466533-2467532 Capsella rubella
Carub.0003s0719 1.0kb downstream 1.0kb downstream 6315 true scaffold_3: 2467533-2473847 Capsella rubella
Carub.0003s0719 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2472848-2473847 Capsella rubella
Carub.0003s0719 2.0kb upstream 2.0kb upstream 7315 true scaffold_3: 2465533-2472847 Capsella rubella
Carub.0003s0719 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2465533-2467532 Capsella rubella
Carub.0003s0719 2.0kb downstream 2.0kb downstream 7315 true scaffold_3: 2467533-2474847 Capsella rubella
Carub.0003s0719 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2472848-2474847 Capsella rubella
Carub.0003s0719 5.0kb upstream 5.0kb upstream 10315 true scaffold_3: 2462533-2472847 Capsella rubella
Carub.0003s0719 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2462533-2467532 Capsella rubella
Carub.0003s0719 5.0kb downstream 5.0kb downstream 10315 true scaffold_3: 2467533-2477847 Capsella rubella
Carub.0003s0719 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2472848-2477847 Capsella rubella
Carub.0003s0719 10.0kb upstream 10.0kb upstream 15315 true scaffold_3: 2457533-2472847 Capsella rubella
Carub.0003s0719 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2457533-2467532 Capsella rubella
Carub.0003s0719 10.0kb downstream 10.0kb downstream 15315 true scaffold_3: 2467533-2482847 Capsella rubella
Carub.0003s0719 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2472848-2482847 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379744 5261 Brassicaceae View MSA
123837186 5264 Brassicales-Malvales View MSA
124350617 5266 SBM View MSA
124252655 5268 Malvidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain