Gene : Araha.1196s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  1
Name:  ? Araha.1196s0001 Secondary Identifier:  ? PAC:28849570

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1196s0001 0.5kb upstream 0.5kb upstream 7323 true Scaffold1196: 6373-13695 Arabidopsis halleri
Araha.1196s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1196: 6373-6872 Arabidopsis halleri
Araha.1196s0001 0.5kb downstream 0.5kb downstream 7323 true Scaffold1196: 6873-14195 Arabidopsis halleri
Araha.1196s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1196: 13696-14195 Arabidopsis halleri
Araha.1196s0001 1.0kb upstream 1.0kb upstream 7823 true Scaffold1196: 5873-13695 Arabidopsis halleri
Araha.1196s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1196: 5873-6872 Arabidopsis halleri
Araha.1196s0001 1.0kb downstream 1.0kb downstream 7823 true Scaffold1196: 6873-14695 Arabidopsis halleri
Araha.1196s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1196: 13696-14695 Arabidopsis halleri
Araha.1196s0001 2.0kb upstream 2.0kb upstream 8823 true Scaffold1196: 4873-13695 Arabidopsis halleri
Araha.1196s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1196: 4873-6872 Arabidopsis halleri
Araha.1196s0001 2.0kb downstream 2.0kb downstream 8823 true Scaffold1196: 6873-15695 Arabidopsis halleri
Araha.1196s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1196: 13696-15695 Arabidopsis halleri
Araha.1196s0001 5.0kb upstream 5.0kb upstream 11823 true Scaffold1196: 1873-13695 Arabidopsis halleri
Araha.1196s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1196: 1873-6872 Arabidopsis halleri
Araha.1196s0001 5.0kb downstream 5.0kb downstream 11823 true Scaffold1196: 6873-18695 Arabidopsis halleri
Araha.1196s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1196: 13696-18695 Arabidopsis halleri
Araha.1196s0001 10.0kb upstream 10.0kb upstream 13695 true Scaffold1196: 1-13695 Arabidopsis halleri
Araha.1196s0001 10.0kb upstream 10.0kb upstream 6872 false Scaffold1196: 1-6872 Arabidopsis halleri
Araha.1196s0001 10.0kb downstream 10.0kb downstream 16823 true Scaffold1196: 6873-23695 Arabidopsis halleri
Araha.1196s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1196: 13696-23695 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372467 5261 Brassicaceae View MSA
123828715 5264 Brassicales-Malvales View MSA
124344653 5266 SBM View MSA
124248823 5268 Malvidae View MSA
124065643 5270 Rosid View MSA
123737984 5271 Pentapetalae View MSA
122795670 5272 Eudicot View MSA
122042624 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain