Gene : Araha.1435s0004 A. halleri v1.1

Defline:  (1 of 1) PTHR12663:SF8 - ENHANCER OF POLYCOMB-LIKE TRANSCRIPTION FACTOR PROTEIN Genomic Order:  4
Name:  ? Araha.1435s0004 Secondary Identifier:  ? PAC:28842595

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1435s0004 0.5kb upstream 0.5kb upstream 6765 true Scaffold1435: 20196-26960 Arabidopsis halleri
Araha.1435s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1435: 26461-26960 Arabidopsis halleri
Araha.1435s0004 0.5kb downstream 0.5kb downstream 6765 true Scaffold1435: 19696-26460 Arabidopsis halleri
Araha.1435s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1435: 19696-20195 Arabidopsis halleri
Araha.1435s0004 1.0kb upstream 1.0kb upstream 7265 true Scaffold1435: 20196-27460 Arabidopsis halleri
Araha.1435s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1435: 26461-27460 Arabidopsis halleri
Araha.1435s0004 1.0kb downstream 1.0kb downstream 7265 true Scaffold1435: 19196-26460 Arabidopsis halleri
Araha.1435s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1435: 19196-20195 Arabidopsis halleri
Araha.1435s0004 2.0kb upstream 2.0kb upstream 8265 true Scaffold1435: 20196-28460 Arabidopsis halleri
Araha.1435s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1435: 26461-28460 Arabidopsis halleri
Araha.1435s0004 2.0kb downstream 2.0kb downstream 8265 true Scaffold1435: 18196-26460 Arabidopsis halleri
Araha.1435s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1435: 18196-20195 Arabidopsis halleri
Araha.1435s0004 5.0kb upstream 5.0kb upstream 11265 true Scaffold1435: 20196-31460 Arabidopsis halleri
Araha.1435s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1435: 26461-31460 Arabidopsis halleri
Araha.1435s0004 5.0kb downstream 5.0kb downstream 11265 true Scaffold1435: 15196-26460 Arabidopsis halleri
Araha.1435s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1435: 15196-20195 Arabidopsis halleri
Araha.1435s0004 10.0kb upstream 10.0kb upstream 16265 true Scaffold1435: 20196-36460 Arabidopsis halleri
Araha.1435s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1435: 26461-36460 Arabidopsis halleri
Araha.1435s0004 10.0kb downstream 10.0kb downstream 16265 true Scaffold1435: 10196-26460 Arabidopsis halleri
Araha.1435s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1435: 10196-20195 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368913 5261 Brassicaceae View MSA
123838304 5264 Brassicales-Malvales View MSA
124336661 5266 SBM View MSA
124247812 5268 Malvidae View MSA
124067852 5270 Rosid View MSA
123743276 5271 Pentapetalae View MSA
122787716 5272 Eudicot View MSA
122044073 5273 Angiosperm View MSA
121310234 5274 Embryophyte View MSA
123347780 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain