Protein : Araha.1554s0001.1.p A. halleri v1.1

Secondary Identifier:  PAC:28837488 Organism Name:  Arabidopsis halleri
Length:  1546   Name:  Araha.1554s0001.1.p
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Proteins

11 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR028083 Domain Spt6 acidic, N-terminal domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Arhalv11005617m_CDS 4638   Scaffold1554: 4642-11770 Arabidopsis halleri

36 Ontology Annotations

Ontology Term Db Gene/Protein Name
IPR028083 InterPro Araha.1554s0001.1.p
IPR027999 InterPro Araha.1554s0001.1.p
IPR017072 InterPro Araha.1554s0001.1.p
IPR022967 InterPro Araha.1554s0001.1.p
IPR012340 InterPro Araha.1554s0001.1.p
IPR010994 InterPro Araha.1554s0001.1.p
IPR012337 InterPro Araha.1554s0001.1.p
IPR000980 InterPro Araha.1554s0001.1.p
IPR003029 InterPro Araha.1554s0001.1.p
GO:0032784 GO Araha.1554s0001.1.p
GO:0003723 GO Araha.1554s0001.1.p
GO:0006357 GO Araha.1554s0001.1.p
GO:0003676 GO Araha.1554s0001.1.p
GO:0003677 GO Araha.1554s0001.1.p
3.2.1.8 ENZYME Araha.1554s0001.1.p
G3DSA:3.30.505.10 GENE3D Araha.1554s0001.1.p
SSF53098 SSF Araha.1554s0001.1.p
SSF55550 SSF Araha.1554s0001.1.p
SSF47781 SSF Araha.1554s0001.1.p
SSF50249 SSF Araha.1554s0001.1.p
SM00316 SMART Araha.1554s0001.1.p
SSF158832 SSF Araha.1554s0001.1.p
PIRSF036947 PIRSF Araha.1554s0001.1.p
PS50126 PROFILE Araha.1554s0001.1.p
PF14641 PFAM Araha.1554s0001.1.p
PF14878 PFAM Araha.1554s0001.1.p
PF14635 PFAM Araha.1554s0001.1.p
PF14639 PFAM Araha.1554s0001.1.p
PF14632 PFAM Araha.1554s0001.1.p
PF14633 PFAM Araha.1554s0001.1.p

0 Pathway Components

0 Pathways