Gene : Araha.4921s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR31057:SF0 - E3 UFM1-PROTEIN LIGASE 1 Genomic Order:  1
Name:  ? Araha.4921s0001 Secondary Identifier:  ? PAC:28861762

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4921s0001 0.5kb upstream 0.5kb upstream 5042 true Scaffold4921: 1458-6499 Arabidopsis halleri
Araha.4921s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4921: 1458-1957 Arabidopsis halleri
Araha.4921s0001 0.5kb downstream 0.5kb downstream 5042 true Scaffold4921: 1958-6999 Arabidopsis halleri
Araha.4921s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4921: 6500-6999 Arabidopsis halleri
Araha.4921s0001 1.0kb upstream 1.0kb upstream 5542 true Scaffold4921: 958-6499 Arabidopsis halleri
Araha.4921s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4921: 958-1957 Arabidopsis halleri
Araha.4921s0001 1.0kb downstream 1.0kb downstream 5542 true Scaffold4921: 1958-7499 Arabidopsis halleri
Araha.4921s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4921: 6500-7499 Arabidopsis halleri
Araha.4921s0001 2.0kb upstream 2.0kb upstream 6499 true Scaffold4921: 1-6499 Arabidopsis halleri
Araha.4921s0001 2.0kb upstream 2.0kb upstream 1957 false Scaffold4921: 1-1957 Arabidopsis halleri
Araha.4921s0001 2.0kb downstream 2.0kb downstream 6542 true Scaffold4921: 1958-8499 Arabidopsis halleri
Araha.4921s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4921: 6500-8499 Arabidopsis halleri
Araha.4921s0001 5.0kb upstream 5.0kb upstream 6499 true Scaffold4921: 1-6499 Arabidopsis halleri
Araha.4921s0001 5.0kb upstream 5.0kb upstream 1957 false Scaffold4921: 1-1957 Arabidopsis halleri
Araha.4921s0001 5.0kb downstream 5.0kb downstream 9542 true Scaffold4921: 1958-11499 Arabidopsis halleri
Araha.4921s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4921: 6500-11499 Arabidopsis halleri
Araha.4921s0001 10.0kb upstream 10.0kb upstream 6499 true Scaffold4921: 1-6499 Arabidopsis halleri
Araha.4921s0001 10.0kb upstream 10.0kb upstream 1957 false Scaffold4921: 1-1957 Arabidopsis halleri
Araha.4921s0001 10.0kb downstream 10.0kb downstream 14542 true Scaffold4921: 1958-16499 Arabidopsis halleri
Araha.4921s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4921: 6500-16499 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026361 5273 Angiosperm View MSA
122361519 5261 Brassicaceae View MSA
123834295 5264 Brassicales-Malvales View MSA
124342202 5266 SBM View MSA
124238478 5268 Malvidae View MSA
124064976 5270 Rosid View MSA
123747410 5271 Pentapetalae View MSA
122787420 5272 Eudicot View MSA
121346113 5274 Embryophyte View MSA
123424330 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain