Gene : Araha.5366s0014 A. halleri v1.1

Defline:  (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE Genomic Order:  14
Name:  ? Araha.5366s0014 Secondary Identifier:  ? PAC:28845143

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5366s0014 0.5kb upstream 0.5kb upstream 2831 true Scaffold5366: 44280-47110 Arabidopsis halleri
Araha.5366s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold5366: 46611-47110 Arabidopsis halleri
Araha.5366s0014 0.5kb downstream 0.5kb downstream 2831 true Scaffold5366: 43780-46610 Arabidopsis halleri
Araha.5366s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold5366: 43780-44279 Arabidopsis halleri
Araha.5366s0014 1.0kb upstream 1.0kb upstream 3331 true Scaffold5366: 44280-47610 Arabidopsis halleri
Araha.5366s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold5366: 46611-47610 Arabidopsis halleri
Araha.5366s0014 1.0kb downstream 1.0kb downstream 3331 true Scaffold5366: 43280-46610 Arabidopsis halleri
Araha.5366s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold5366: 43280-44279 Arabidopsis halleri
Araha.5366s0014 2.0kb upstream 2.0kb upstream 4331 true Scaffold5366: 44280-48610 Arabidopsis halleri
Araha.5366s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold5366: 46611-48610 Arabidopsis halleri
Araha.5366s0014 2.0kb downstream 2.0kb downstream 4331 true Scaffold5366: 42280-46610 Arabidopsis halleri
Araha.5366s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold5366: 42280-44279 Arabidopsis halleri
Araha.5366s0014 5.0kb upstream 5.0kb upstream 7331 true Scaffold5366: 44280-51610 Arabidopsis halleri
Araha.5366s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold5366: 46611-51610 Arabidopsis halleri
Araha.5366s0014 5.0kb downstream 5.0kb downstream 7331 true Scaffold5366: 39280-46610 Arabidopsis halleri
Araha.5366s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold5366: 39280-44279 Arabidopsis halleri
Araha.5366s0014 10.0kb upstream 10.0kb upstream 12331 true Scaffold5366: 44280-56610 Arabidopsis halleri
Araha.5366s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold5366: 46611-56610 Arabidopsis halleri
Araha.5366s0014 10.0kb downstream 10.0kb downstream 12331 true Scaffold5366: 34280-46610 Arabidopsis halleri
Araha.5366s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold5366: 34280-44279 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361810 5261 Brassicaceae View MSA
123829469 5264 Brassicales-Malvales View MSA
124346141 5266 SBM View MSA
124239215 5268 Malvidae View MSA
124068873 5270 Rosid View MSA
123737735 5271 Pentapetalae View MSA
122788749 5272 Eudicot View MSA
122042435 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain