Gene : Araha.5658s0011 A. halleri v1.1
Defline:  (1 of 1) PTHR23063:SF2 - PROTEIN ACL-5, ISOFORM A Genomic Order:  11
Name:  ? Araha.5658s0011 Secondary Identifier:  ? PAC:28860787
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY0-1319 Arabidopsis halleri pathologic  
Ahalleri PWY4FS-7 Arabidopsis halleri pathologic  
Ahalleri PWY-7411 Arabidopsis halleri pathologic  
Ahalleri TRIGLSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5658s0011 0.5kb upstream 0.5kb upstream 2645 true Scaffold5658: 31875-34519 Arabidopsis halleri
Araha.5658s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold5658: 31875-32374 Arabidopsis halleri
Araha.5658s0011 0.5kb downstream 0.5kb downstream 2645 true Scaffold5658: 32375-35019 Arabidopsis halleri
Araha.5658s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold5658: 34520-35019 Arabidopsis halleri
Araha.5658s0011 1.0kb upstream 1.0kb upstream 3145 true Scaffold5658: 31375-34519 Arabidopsis halleri
Araha.5658s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold5658: 31375-32374 Arabidopsis halleri
Araha.5658s0011 1.0kb downstream 1.0kb downstream 3145 true Scaffold5658: 32375-35519 Arabidopsis halleri
Araha.5658s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold5658: 34520-35519 Arabidopsis halleri
Araha.5658s0011 2.0kb upstream 2.0kb upstream 4145 true Scaffold5658: 30375-34519 Arabidopsis halleri
Araha.5658s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold5658: 30375-32374 Arabidopsis halleri
Araha.5658s0011 2.0kb downstream 2.0kb downstream 4145 true Scaffold5658: 32375-36519 Arabidopsis halleri
Araha.5658s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold5658: 34520-36519 Arabidopsis halleri
Araha.5658s0011 5.0kb upstream 5.0kb upstream 7145 true Scaffold5658: 27375-34519 Arabidopsis halleri
Araha.5658s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold5658: 27375-32374 Arabidopsis halleri
Araha.5658s0011 5.0kb downstream 5.0kb downstream 7145 true Scaffold5658: 32375-39519 Arabidopsis halleri
Araha.5658s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold5658: 34520-39519 Arabidopsis halleri
Araha.5658s0011 10.0kb upstream 10.0kb upstream 12145 true Scaffold5658: 22375-34519 Arabidopsis halleri
Araha.5658s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold5658: 22375-32374 Arabidopsis halleri
Araha.5658s0011 10.0kb downstream 10.0kb downstream 12145 true Scaffold5658: 32375-44519 Arabidopsis halleri
Araha.5658s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold5658: 34520-44519 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372849 5261 Brassicaceae View MSA
123831200 5264 Brassicales-Malvales View MSA
124336652 5266 SBM View MSA
124240700 5268 Malvidae View MSA
124065139 5270 Rosid View MSA
123751222 5271 Pentapetalae View MSA
122796143 5272 Eudicot View MSA
122045469 5273 Angiosperm View MSA
121344945 5274 Embryophyte View MSA
123427569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain