Gene : Araha.16722s0001 A. halleri v1.1

Defline:  (1 of 1) KOG0131//KOG4210 - Splicing factor 3b, subunit 4 // Nuclear localization sequence binding protein Genomic Order:  1
Name:  ? Araha.16722s0001 Secondary Identifier:  ? PAC:28860328

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16722s0001 0.5kb upstream 0.5kb upstream 3091 true Scaffold16722: 9036-12126 Arabidopsis halleri
Araha.16722s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold16722: 9036-9535 Arabidopsis halleri
Araha.16722s0001 0.5kb downstream 0.5kb downstream 3091 true Scaffold16722: 9536-12626 Arabidopsis halleri
Araha.16722s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16722: 12127-12626 Arabidopsis halleri
Araha.16722s0001 1.0kb upstream 1.0kb upstream 3591 true Scaffold16722: 8536-12126 Arabidopsis halleri
Araha.16722s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold16722: 8536-9535 Arabidopsis halleri
Araha.16722s0001 1.0kb downstream 1.0kb downstream 3591 true Scaffold16722: 9536-13126 Arabidopsis halleri
Araha.16722s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16722: 12127-13126 Arabidopsis halleri
Araha.16722s0001 2.0kb upstream 2.0kb upstream 4591 true Scaffold16722: 7536-12126 Arabidopsis halleri
Araha.16722s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold16722: 7536-9535 Arabidopsis halleri
Araha.16722s0001 2.0kb downstream 2.0kb downstream 4591 true Scaffold16722: 9536-14126 Arabidopsis halleri
Araha.16722s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold16722: 12127-14126 Arabidopsis halleri
Araha.16722s0001 5.0kb upstream 5.0kb upstream 7591 true Scaffold16722: 4536-12126 Arabidopsis halleri
Araha.16722s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold16722: 4536-9535 Arabidopsis halleri
Araha.16722s0001 5.0kb downstream 5.0kb downstream 7591 true Scaffold16722: 9536-17126 Arabidopsis halleri
Araha.16722s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold16722: 12127-17126 Arabidopsis halleri
Araha.16722s0001 10.0kb upstream 10.0kb upstream 12126 true Scaffold16722: 1-12126 Arabidopsis halleri
Araha.16722s0001 10.0kb upstream 10.0kb upstream 9535 false Scaffold16722: 1-9535 Arabidopsis halleri
Araha.16722s0001 10.0kb downstream 10.0kb downstream 12398 true Scaffold16722: 9536-21933 Arabidopsis halleri
Araha.16722s0001 10.0kb downstream 10.0kb downstream 9807 false Scaffold16722: 12127-21933 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372555 5261 Brassicaceae View MSA
123837031 5264 Brassicales-Malvales View MSA
124339957 5266 SBM View MSA
124251598 5268 Malvidae View MSA
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain