Gene : Araha.25974s0002 A. halleri v1.1
Defline:  (1 of 5) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  2
Name:  ? Araha.25974s0002 Secondary Identifier:  ? PAC:28841968
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25974s0002 0.5kb upstream 0.5kb upstream 1752 true Scaffold25974: 9520-11271 Arabidopsis halleri
Araha.25974s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold25974: 9520-10019 Arabidopsis halleri
Araha.25974s0002 0.5kb downstream 0.5kb downstream 1752 true Scaffold25974: 10020-11771 Arabidopsis halleri
Araha.25974s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold25974: 11272-11771 Arabidopsis halleri
Araha.25974s0002 1.0kb upstream 1.0kb upstream 2252 true Scaffold25974: 9020-11271 Arabidopsis halleri
Araha.25974s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold25974: 9020-10019 Arabidopsis halleri
Araha.25974s0002 1.0kb downstream 1.0kb downstream 2252 true Scaffold25974: 10020-12271 Arabidopsis halleri
Araha.25974s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold25974: 11272-12271 Arabidopsis halleri
Araha.25974s0002 2.0kb upstream 2.0kb upstream 3252 true Scaffold25974: 8020-11271 Arabidopsis halleri
Araha.25974s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold25974: 8020-10019 Arabidopsis halleri
Araha.25974s0002 2.0kb downstream 2.0kb downstream 3252 true Scaffold25974: 10020-13271 Arabidopsis halleri
Araha.25974s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold25974: 11272-13271 Arabidopsis halleri
Araha.25974s0002 5.0kb upstream 5.0kb upstream 6252 true Scaffold25974: 5020-11271 Arabidopsis halleri
Araha.25974s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold25974: 5020-10019 Arabidopsis halleri
Araha.25974s0002 5.0kb downstream 5.0kb downstream 6252 true Scaffold25974: 10020-16271 Arabidopsis halleri
Araha.25974s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold25974: 11272-16271 Arabidopsis halleri
Araha.25974s0002 10.0kb upstream 10.0kb upstream 11252 true Scaffold25974: 20-11271 Arabidopsis halleri
Araha.25974s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold25974: 20-10019 Arabidopsis halleri
Araha.25974s0002 10.0kb downstream 10.0kb downstream 11252 true Scaffold25974: 10020-21271 Arabidopsis halleri
Araha.25974s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold25974: 11272-21271 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367409 5261 Brassicaceae View MSA
123838287 5264 Brassicales-Malvales View MSA
124342273 5266 SBM View MSA
124246000 5268 Malvidae View MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain