Gene : Cagra.0247s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  1
Name:  ? Cagra.0247s0001 Secondary Identifier:  ? PAC:28897320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0247s0001 0.5kb upstream 0.5kb upstream 7289 true Scaffold247: 5262-12550 Capsella grandiflora
Cagra.0247s0001 0.5kb upstream 0.5kb upstream 45 false Scaffold247: 12506-12550 Capsella grandiflora
Cagra.0247s0001 0.5kb downstream 0.5kb downstream 7744 true Scaffold247: 4762-12505 Capsella grandiflora
Cagra.0247s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold247: 4762-5261 Capsella grandiflora
Cagra.0247s0001 1.0kb upstream 1.0kb upstream 7289 true Scaffold247: 5262-12550 Capsella grandiflora
Cagra.0247s0001 1.0kb upstream 1.0kb upstream 45 false Scaffold247: 12506-12550 Capsella grandiflora
Cagra.0247s0001 1.0kb downstream 1.0kb downstream 8244 true Scaffold247: 4262-12505 Capsella grandiflora
Cagra.0247s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold247: 4262-5261 Capsella grandiflora
Cagra.0247s0001 2.0kb upstream 2.0kb upstream 7289 true Scaffold247: 5262-12550 Capsella grandiflora
Cagra.0247s0001 2.0kb upstream 2.0kb upstream 45 false Scaffold247: 12506-12550 Capsella grandiflora
Cagra.0247s0001 2.0kb downstream 2.0kb downstream 9244 true Scaffold247: 3262-12505 Capsella grandiflora
Cagra.0247s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold247: 3262-5261 Capsella grandiflora
Cagra.0247s0001 5.0kb upstream 5.0kb upstream 7289 true Scaffold247: 5262-12550 Capsella grandiflora
Cagra.0247s0001 5.0kb upstream 5.0kb upstream 45 false Scaffold247: 12506-12550 Capsella grandiflora
Cagra.0247s0001 5.0kb downstream 5.0kb downstream 12244 true Scaffold247: 262-12505 Capsella grandiflora
Cagra.0247s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold247: 262-5261 Capsella grandiflora
Cagra.0247s0001 10.0kb upstream 10.0kb upstream 7289 true Scaffold247: 5262-12550 Capsella grandiflora
Cagra.0247s0001 10.0kb upstream 10.0kb upstream 45 false Scaffold247: 12506-12550 Capsella grandiflora
Cagra.0247s0001 10.0kb downstream 10.0kb downstream 12505 true Scaffold247: 1-12505 Capsella grandiflora
Cagra.0247s0001 10.0kb downstream 10.0kb downstream 5261 false Scaffold247: 1-5261 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026403 5273 Angiosperm View MSA
122363315 5261 Brassicaceae View MSA
123839945 5264 Brassicales-Malvales View MSA
124339631 5266 SBM View MSA
124247818 5268 Malvidae View MSA
124066178 5270 Rosid View MSA
123742031 5271 Pentapetalae View MSA
122789000 5272 Eudicot View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain