Gene : Cagra.0316s0084 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 Genomic Order:  84
Name:  ? Cagra.0316s0084 Secondary Identifier:  ? PAC:28915682
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0084 0.5kb upstream 0.5kb upstream 3868 true Scaffold316: 322669-326536 Capsella grandiflora
Cagra.0316s0084 0.5kb upstream 0.5kb upstream 36 false Scaffold316: 326501-326536 Capsella grandiflora
Cagra.0316s0084 0.5kb downstream 0.5kb downstream 4332 true Scaffold316: 322169-326500 Capsella grandiflora
Cagra.0316s0084 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 322169-322668 Capsella grandiflora
Cagra.0316s0084 1.0kb upstream 1.0kb upstream 3868 true Scaffold316: 322669-326536 Capsella grandiflora
Cagra.0316s0084 1.0kb upstream 1.0kb upstream 36 false Scaffold316: 326501-326536 Capsella grandiflora
Cagra.0316s0084 1.0kb downstream 1.0kb downstream 4832 true Scaffold316: 321669-326500 Capsella grandiflora
Cagra.0316s0084 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 321669-322668 Capsella grandiflora
Cagra.0316s0084 2.0kb upstream 2.0kb upstream 3868 true Scaffold316: 322669-326536 Capsella grandiflora
Cagra.0316s0084 2.0kb upstream 2.0kb upstream 36 false Scaffold316: 326501-326536 Capsella grandiflora
Cagra.0316s0084 2.0kb downstream 2.0kb downstream 5832 true Scaffold316: 320669-326500 Capsella grandiflora
Cagra.0316s0084 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 320669-322668 Capsella grandiflora
Cagra.0316s0084 5.0kb upstream 5.0kb upstream 3868 true Scaffold316: 322669-326536 Capsella grandiflora
Cagra.0316s0084 5.0kb upstream 5.0kb upstream 36 false Scaffold316: 326501-326536 Capsella grandiflora
Cagra.0316s0084 5.0kb downstream 5.0kb downstream 8832 true Scaffold316: 317669-326500 Capsella grandiflora
Cagra.0316s0084 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 317669-322668 Capsella grandiflora
Cagra.0316s0084 10.0kb upstream 10.0kb upstream 3868 true Scaffold316: 322669-326536 Capsella grandiflora
Cagra.0316s0084 10.0kb upstream 10.0kb upstream 36 false Scaffold316: 326501-326536 Capsella grandiflora
Cagra.0316s0084 10.0kb downstream 10.0kb downstream 13832 true Scaffold316: 312669-326500 Capsella grandiflora
Cagra.0316s0084 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 312669-322668 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333500 5261 Brassicaceae Singleton cluster - no MSA
123774436 5264 Brassicales-Malvales Singleton cluster - no MSA
124272873 5266 SBM Singleton cluster - no MSA
124249754 5268 Malvidae View MSA
124068165 5270 Rosid View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain