Gene : Cagra.0612s0076 C. grandiflora v1.1
Defline:  (1 of 5) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) Genomic Order:  76
Name:  ? Cagra.0612s0076 Secondary Identifier:  ? PAC:28917604
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0076 0.5kb upstream 0.5kb upstream 2900 true Scaffold612: 270057-272956 Capsella grandiflora
Cagra.0612s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 272457-272956 Capsella grandiflora
Cagra.0612s0076 0.5kb downstream 0.5kb downstream 2900 true Scaffold612: 269557-272456 Capsella grandiflora
Cagra.0612s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 269557-270056 Capsella grandiflora
Cagra.0612s0076 1.0kb upstream 1.0kb upstream 3400 true Scaffold612: 270057-273456 Capsella grandiflora
Cagra.0612s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 272457-273456 Capsella grandiflora
Cagra.0612s0076 1.0kb downstream 1.0kb downstream 3400 true Scaffold612: 269057-272456 Capsella grandiflora
Cagra.0612s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 269057-270056 Capsella grandiflora
Cagra.0612s0076 2.0kb upstream 2.0kb upstream 4400 true Scaffold612: 270057-274456 Capsella grandiflora
Cagra.0612s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 272457-274456 Capsella grandiflora
Cagra.0612s0076 2.0kb downstream 2.0kb downstream 4400 true Scaffold612: 268057-272456 Capsella grandiflora
Cagra.0612s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 268057-270056 Capsella grandiflora
Cagra.0612s0076 5.0kb upstream 5.0kb upstream 7400 true Scaffold612: 270057-277456 Capsella grandiflora
Cagra.0612s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 272457-277456 Capsella grandiflora
Cagra.0612s0076 5.0kb downstream 5.0kb downstream 7400 true Scaffold612: 265057-272456 Capsella grandiflora
Cagra.0612s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 265057-270056 Capsella grandiflora
Cagra.0612s0076 10.0kb upstream 10.0kb upstream 12400 true Scaffold612: 270057-282456 Capsella grandiflora
Cagra.0612s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 272457-282456 Capsella grandiflora
Cagra.0612s0076 10.0kb downstream 10.0kb downstream 12400 true Scaffold612: 260057-272456 Capsella grandiflora
Cagra.0612s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 260057-270056 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372820 5261 Brassicaceae View MSA
123837908 5264 Brassicales-Malvales View MSA
124344702 5266 SBM View MSA
124237572 5268 Malvidae View MSA
124062846 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain