Gene : Cagra.0690s0046 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 Genomic Order:  46
Name:  ? Cagra.0690s0046 Secondary Identifier:  ? PAC:28893746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0046 0.5kb upstream 0.5kb upstream 3203 true Scaffold690: 187588-190790 Capsella grandiflora
Cagra.0690s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 190291-190790 Capsella grandiflora
Cagra.0690s0046 0.5kb downstream 0.5kb downstream 3203 true Scaffold690: 187088-190290 Capsella grandiflora
Cagra.0690s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 187088-187587 Capsella grandiflora
Cagra.0690s0046 1.0kb upstream 1.0kb upstream 3703 true Scaffold690: 187588-191290 Capsella grandiflora
Cagra.0690s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 190291-191290 Capsella grandiflora
Cagra.0690s0046 1.0kb downstream 1.0kb downstream 3703 true Scaffold690: 186588-190290 Capsella grandiflora
Cagra.0690s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 186588-187587 Capsella grandiflora
Cagra.0690s0046 2.0kb upstream 2.0kb upstream 4703 true Scaffold690: 187588-192290 Capsella grandiflora
Cagra.0690s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 190291-192290 Capsella grandiflora
Cagra.0690s0046 2.0kb downstream 2.0kb downstream 4703 true Scaffold690: 185588-190290 Capsella grandiflora
Cagra.0690s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 185588-187587 Capsella grandiflora
Cagra.0690s0046 5.0kb upstream 5.0kb upstream 7703 true Scaffold690: 187588-195290 Capsella grandiflora
Cagra.0690s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 190291-195290 Capsella grandiflora
Cagra.0690s0046 5.0kb downstream 5.0kb downstream 7703 true Scaffold690: 182588-190290 Capsella grandiflora
Cagra.0690s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 182588-187587 Capsella grandiflora
Cagra.0690s0046 10.0kb upstream 10.0kb upstream 12703 true Scaffold690: 187588-200290 Capsella grandiflora
Cagra.0690s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 190291-200290 Capsella grandiflora
Cagra.0690s0046 10.0kb downstream 10.0kb downstream 12703 true Scaffold690: 177588-190290 Capsella grandiflora
Cagra.0690s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 177588-187587 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372270 5261 Brassicaceae View MSA
123836088 5264 Brassicales-Malvales View MSA
124322130 5266 SBM View MSA
124252453 5268 Malvidae View MSA
124068124 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain