Gene : Cagra.0906s0018 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 Genomic Order:  18
Name:  ? Cagra.0906s0018 Secondary Identifier:  ? PAC:28900105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0906s0018 0.5kb upstream 0.5kb upstream 6551 true Scaffold906: 43912-50462 Capsella grandiflora
Cagra.0906s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold906: 49963-50462 Capsella grandiflora
Cagra.0906s0018 0.5kb downstream 0.5kb downstream 6551 true Scaffold906: 43412-49962 Capsella grandiflora
Cagra.0906s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold906: 43412-43911 Capsella grandiflora
Cagra.0906s0018 1.0kb upstream 1.0kb upstream 7051 true Scaffold906: 43912-50962 Capsella grandiflora
Cagra.0906s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold906: 49963-50962 Capsella grandiflora
Cagra.0906s0018 1.0kb downstream 1.0kb downstream 7051 true Scaffold906: 42912-49962 Capsella grandiflora
Cagra.0906s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold906: 42912-43911 Capsella grandiflora
Cagra.0906s0018 2.0kb upstream 2.0kb upstream 8051 true Scaffold906: 43912-51962 Capsella grandiflora
Cagra.0906s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold906: 49963-51962 Capsella grandiflora
Cagra.0906s0018 2.0kb downstream 2.0kb downstream 8051 true Scaffold906: 41912-49962 Capsella grandiflora
Cagra.0906s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold906: 41912-43911 Capsella grandiflora
Cagra.0906s0018 5.0kb upstream 5.0kb upstream 11051 true Scaffold906: 43912-54962 Capsella grandiflora
Cagra.0906s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold906: 49963-54962 Capsella grandiflora
Cagra.0906s0018 5.0kb downstream 5.0kb downstream 11051 true Scaffold906: 38912-49962 Capsella grandiflora
Cagra.0906s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold906: 38912-43911 Capsella grandiflora
Cagra.0906s0018 10.0kb upstream 10.0kb upstream 16051 true Scaffold906: 43912-59962 Capsella grandiflora
Cagra.0906s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold906: 49963-59962 Capsella grandiflora
Cagra.0906s0018 10.0kb downstream 10.0kb downstream 16051 true Scaffold906: 33912-49962 Capsella grandiflora
Cagra.0906s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold906: 33912-43911 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366537 5261 Brassicaceae View MSA
123832335 5264 Brassicales-Malvales View MSA
124351039 5266 SBM View MSA
124241453 5268 Malvidae View MSA
124060805 5270 Rosid View MSA
123746198 5271 Pentapetalae View MSA
122787645 5272 Eudicot View MSA
122046852 5273 Angiosperm View MSA
121349524 5274 Embryophyte View MSA
123426579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain