Protein Family : CCR4-NOT transcription factor, putative, expressed 122046852

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  81

81 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29950.t000034 (1 of 1) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3) R. communis v0.1 9136   29950: 182416-191551
Cucsa.340590 (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 C. sativus v1.0 26622   scaffold03356: 2974305-3000926
orange1.1g002678m.g (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 C. sinensis v1.1 12804   scaffold00117: 378078-390881
AT5G18230 (1 of 1) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3) A. thaliana TAIR10 5806   Chr5: 6021444-6027249
Thhalv10012672m.g (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 E. salsugineum v1.0 5596   scaffold_2: 6192334-6197929
Ciclev10018788m.g (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 C. clementina v1.0 12253   scaffold_3: 41254856-41267108
Lus10002632.g (1 of 2) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 L. usitatissimum v1.0 6002   scaffold2083: 82693-88694
Lus10020262.g (1 of 2) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 L. usitatissimum v1.0 6027   scaffold641: 124879-130905
Gorai.013G123000 (1 of 2) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 G. raimondii v2.1 9118   Chr13: 31606690-31615807
Gorai.007G287600 (1 of 2) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 G. raimondii v2.1 7842   Chr07: 49414363-49422204
Thecc1EG026449 (1 of 1) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3) T. cacao v1.1 8362   scaffold_5: 38311682-38320043
Migut.K00002 (1 of 4) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 M. guttatus v2.0 8174   scaffold_11: 42146-50319
Migut.N01517 (1 of 4) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 M. guttatus v2.0 8771   scaffold_14: 13476589-13485359
Araha.8689s0018 (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 A. halleri v1.1 5843   Scaffold8689: 50822-56664
Cagra.0906s0018 (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 C. grandiflora v1.1 6051   Scaffold906: 43912-49962
Glyma.16G042600 (1 of 4) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 G. max Wm82.a2.v1 11820   Chr16: 3964264-3976083
Glyma.16G152500 (1 of 4) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 G. max Wm82.a2.v1 13870   Chr16: 31305625-31319494
Glyma.02G071300 (1 of 4) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 G. max Wm82.a2.v1 11289   Chr02: 6258325-6269613
Glyma.19G109500 (1 of 4) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 G. max Wm82.a2.v1 19493   Chr19: 36312452-36331944
Brara.J01740 (1 of 2) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 B. rapa FPsc v1.3 5431   A10: 14565916-14571346
Bostr.26527s0385 (1 of 2) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 B. stricta v1.2 6152   Scaffold26527: 2221159-2227310
Medtr7g085350 (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 M. truncatula Mt4.0v1 13086   chr7: 33041286-33054371
SapurV1A.1928s0010 (1 of 2) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3) S. purpurea v1.0 11532   chr13: 5513859-5525390
evm_27.TU.AmTr_v1.0_scaffold00004.76 (1 of 1) KOG2150 - CCR4-NOT transcriptional regulation complex, NOT5 subunit A. trichopoda v1.0 16396   AmTr_v1.0_scaffold00004: 1108308-1124703
evm_27.TU.AmTr_v1.0_scaffold00012.161 (1 of 2) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 A. trichopoda v1.0 11736   AmTr_v1.0_scaffold00012: 4352685-4364420
Traes_4AL_DF50540B4 (1 of 3) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 T. aestivum v2.2 7942   ta_iwgsc_4al_v2_7157194: 2-7943
Traes_4BS_6943FED4B (1 of 3) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 T. aestivum v2.2 7706   ta_iwgsc_4bs_v1_4866920: 9466-17171
Traes_4DS_7B2AFD0EC (1 of 3) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 T. aestivum v2.2 8089   ta_iwgsc_4ds_v1_2304251: 467-8555
Eucgr.A02083 (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 E. grandis v2.0 11978   Chr01: 36284058-36296035
Prupe.5G242100 (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 P. persica v2.1 9135   Pp05: 18212923-18222057

81 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10012672m E. salsugineum v1.0 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
Lus10020262 L. usitatissimum v1.0 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Lus10002632 L. usitatissimum v1.0 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Gorai.007G287600.1 G. raimondii v2.1 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Araha.8689s0018.1.p A. halleri v1.1 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
Glyma.02G071300.1.p G. max Wm82.a2.v1 122046852 CCR4-NOT transcription factor, putative, expressed 4 5273 Angiosperm
Glyma.16G152500.1.p G. max Wm82.a2.v1 122046852 CCR4-NOT transcription factor, putative, expressed 4 5273 Angiosperm
Medtr7g085350.1 M. truncatula Mt4.0v1 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
SapurV1A.1928s0010.1.p S. purpurea v1.0 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00004.76 A. trichopoda v1.0 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00012.161 A. trichopoda v1.0 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Traes_4AL_DF50540B4.3 T. aestivum v2.2 122046852 CCR4-NOT transcription factor, putative, expressed 3 5273 Angiosperm
Traes_4DS_7B2AFD0EC.2 T. aestivum v2.2 122046852 CCR4-NOT transcription factor, putative, expressed 3 5273 Angiosperm
Traes_4BS_6943FED4B.1 T. aestivum v2.2 122046852 CCR4-NOT transcription factor, putative, expressed 3 5273 Angiosperm
Eucgr.A02083.1.p E. grandis v2.0 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
GSMUA_Achr4P21430_001 M. acuminata v1 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
GSMUA_Achr5P02820_001 M. acuminata v1 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Kalax.0341s0034.1.p K. laxiflora v1.1 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Kalax.0335s0037.1.p K. laxiflora v1.1 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Bradi1g13450.1.p B. distachyon v3.1 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
Brast02G250900.1.p B. stacei v1.1 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
Aco008780.1 A. comosus v3 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Aco005171.1 A. comosus v3 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
Aqcoe2G061400.1.p A. coerulea v3.1 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
LOC_Os03g44900.1 O. sativa v7.0 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
Zosma37g00230.1 Z. marina v2.2 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
Kaladp0550s0077.1.p K. fedtschenkoi v1.1 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
AL6G29440.t3 A. lyrata v2.1 122046852 CCR4-NOT transcription factor, putative, expressed 1 5273 Angiosperm
DCAR_013693 D. carota v2.0 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm
AUR62032669-RA C. quinoa v1.0 122046852 CCR4-NOT transcription factor, putative, expressed 2 5273 Angiosperm