Gene : Medtr7g085350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 Description:  transcription regulator NOT2/NOT3/NOT5 family protein
Genomic Order:  3933 Name:  ? Medtr7g085350
Secondary Identifier:  ? PAC:31078856
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g085350 0.5kb upstream 0.5kb upstream 13586 true chr7: 33040786-33054371 Medicago truncatula
Medtr7g085350 0.5kb upstream 0.5kb upstream 500 false chr7: 33040786-33041285 Medicago truncatula
Medtr7g085350 0.5kb downstream 0.5kb downstream 13586 true chr7: 33041286-33054871 Medicago truncatula
Medtr7g085350 0.5kb downstream 0.5kb downstream 500 false chr7: 33054372-33054871 Medicago truncatula
Medtr7g085350 1.0kb upstream 1.0kb upstream 14086 true chr7: 33040286-33054371 Medicago truncatula
Medtr7g085350 1.0kb upstream 1.0kb upstream 1000 false chr7: 33040286-33041285 Medicago truncatula
Medtr7g085350 1.0kb downstream 1.0kb downstream 14086 true chr7: 33041286-33055371 Medicago truncatula
Medtr7g085350 1.0kb downstream 1.0kb downstream 1000 false chr7: 33054372-33055371 Medicago truncatula
Medtr7g085350 2.0kb upstream 2.0kb upstream 15086 true chr7: 33039286-33054371 Medicago truncatula
Medtr7g085350 2.0kb upstream 2.0kb upstream 2000 false chr7: 33039286-33041285 Medicago truncatula
Medtr7g085350 2.0kb downstream 2.0kb downstream 15086 true chr7: 33041286-33056371 Medicago truncatula
Medtr7g085350 2.0kb downstream 2.0kb downstream 2000 false chr7: 33054372-33056371 Medicago truncatula
Medtr7g085350 5.0kb upstream 5.0kb upstream 18086 true chr7: 33036286-33054371 Medicago truncatula
Medtr7g085350 5.0kb upstream 5.0kb upstream 5000 false chr7: 33036286-33041285 Medicago truncatula
Medtr7g085350 5.0kb downstream 5.0kb downstream 18086 true chr7: 33041286-33059371 Medicago truncatula
Medtr7g085350 5.0kb downstream 5.0kb downstream 5000 false chr7: 33054372-33059371 Medicago truncatula
Medtr7g085350 10.0kb upstream 10.0kb upstream 23086 true chr7: 33031286-33054371 Medicago truncatula
Medtr7g085350 10.0kb upstream 10.0kb upstream 10000 false chr7: 33031286-33041285 Medicago truncatula
Medtr7g085350 10.0kb downstream 10.0kb downstream 23086 true chr7: 33041286-33064371 Medicago truncatula
Medtr7g085350 10.0kb downstream 10.0kb downstream 10000 false chr7: 33054372-33064371 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301146 5265 Fabidae View MSA
124060805 5270 Rosid View MSA
123746198 5271 Pentapetalae View MSA
122787645 5272 Eudicot View MSA
122046852 5273 Angiosperm View MSA
121349524 5274 Embryophyte View MSA
123426579 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.769       High
cufflinks 3.52        
cufflinks 3.523        
cufflinks 1.077       Low
cufflinks 2.91        
cufflinks 0.964       Low
cufflinks 2.583        
cufflinks 3.558        
cufflinks 2.652        

0 Strain