Gene : Eucgr.A02083 E. grandis v2.0
Defline:  (1 of 1) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 Genomic Order:  1871
Name:  ? Eucgr.A02083 Secondary Identifier:  ? PAC:32048686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02083 0.5kb upstream 0.5kb upstream 12478 true Chr01: 36283558-36296035 Eucalyptus grandis
Eucgr.A02083 0.5kb upstream 0.5kb upstream 500 false Chr01: 36283558-36284057 Eucalyptus grandis
Eucgr.A02083 0.5kb downstream 0.5kb downstream 12478 true Chr01: 36284058-36296535 Eucalyptus grandis
Eucgr.A02083 0.5kb downstream 0.5kb downstream 500 false Chr01: 36296036-36296535 Eucalyptus grandis
Eucgr.A02083 1.0kb upstream 1.0kb upstream 12978 true Chr01: 36283058-36296035 Eucalyptus grandis
Eucgr.A02083 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36283058-36284057 Eucalyptus grandis
Eucgr.A02083 1.0kb downstream 1.0kb downstream 12978 true Chr01: 36284058-36297035 Eucalyptus grandis
Eucgr.A02083 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36296036-36297035 Eucalyptus grandis
Eucgr.A02083 2.0kb upstream 2.0kb upstream 13978 true Chr01: 36282058-36296035 Eucalyptus grandis
Eucgr.A02083 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36282058-36284057 Eucalyptus grandis
Eucgr.A02083 2.0kb downstream 2.0kb downstream 13978 true Chr01: 36284058-36298035 Eucalyptus grandis
Eucgr.A02083 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36296036-36298035 Eucalyptus grandis
Eucgr.A02083 5.0kb upstream 5.0kb upstream 16978 true Chr01: 36279058-36296035 Eucalyptus grandis
Eucgr.A02083 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36279058-36284057 Eucalyptus grandis
Eucgr.A02083 5.0kb downstream 5.0kb downstream 16978 true Chr01: 36284058-36301035 Eucalyptus grandis
Eucgr.A02083 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36296036-36301035 Eucalyptus grandis
Eucgr.A02083 10.0kb upstream 10.0kb upstream 21978 true Chr01: 36274058-36296035 Eucalyptus grandis
Eucgr.A02083 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36274058-36284057 Eucalyptus grandis
Eucgr.A02083 10.0kb downstream 10.0kb downstream 21978 true Chr01: 36284058-36306035 Eucalyptus grandis
Eucgr.A02083 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36296036-36306035 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060805 5270 Rosid View MSA
123746198 5271 Pentapetalae View MSA
122787645 5272 Eudicot View MSA
122046852 5273 Angiosperm View MSA
121349524 5274 Embryophyte View MSA
123426579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7387 0.0 51.1845    
cufflinks 20.1841 0.0 51.2479    
cufflinks 17.9819 0.0 45.8709    
cufflinks 16.3509 0.0 41.8973    
cufflinks 15.1747 0.0 34.1486   Low
cufflinks 21.416 0.0 58.5731   High

0 Strain