Gene : Glyma.02G071300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23326:SF1 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 Genomic Order:  713
Name:  ? Glyma.02G071300 Secondary Identifier:  ? PAC:30506751
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G071300 0.5kb upstream 0.5kb upstream 11789 true Chr02: 6257825-6269613 Glycine max
Glyma.02G071300 0.5kb upstream 0.5kb upstream 500 false Chr02: 6257825-6258324 Glycine max
Glyma.02G071300 0.5kb downstream 0.5kb downstream 11789 true Chr02: 6258325-6270113 Glycine max
Glyma.02G071300 0.5kb downstream 0.5kb downstream 500 false Chr02: 6269614-6270113 Glycine max
Glyma.02G071300 1.0kb upstream 1.0kb upstream 12289 true Chr02: 6257325-6269613 Glycine max
Glyma.02G071300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6257325-6258324 Glycine max
Glyma.02G071300 1.0kb downstream 1.0kb downstream 12289 true Chr02: 6258325-6270613 Glycine max
Glyma.02G071300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6269614-6270613 Glycine max
Glyma.02G071300 2.0kb upstream 2.0kb upstream 13289 true Chr02: 6256325-6269613 Glycine max
Glyma.02G071300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6256325-6258324 Glycine max
Glyma.02G071300 2.0kb downstream 2.0kb downstream 13289 true Chr02: 6258325-6271613 Glycine max
Glyma.02G071300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6269614-6271613 Glycine max
Glyma.02G071300 5.0kb upstream 5.0kb upstream 16289 true Chr02: 6253325-6269613 Glycine max
Glyma.02G071300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6253325-6258324 Glycine max
Glyma.02G071300 5.0kb downstream 5.0kb downstream 16289 true Chr02: 6258325-6274613 Glycine max
Glyma.02G071300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6269614-6274613 Glycine max
Glyma.02G071300 10.0kb upstream 10.0kb upstream 21289 true Chr02: 6248325-6269613 Glycine max
Glyma.02G071300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6248325-6258324 Glycine max
Glyma.02G071300 10.0kb downstream 10.0kb downstream 21289 true Chr02: 6258325-6279613 Glycine max
Glyma.02G071300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6269614-6279613 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254229 5265 Fabidae View MSA
124060805 5270 Rosid View MSA
123746198 5271 Pentapetalae View MSA
122787645 5272 Eudicot View MSA
122046852 5273 Angiosperm View MSA
121349524 5274 Embryophyte View MSA
123426579 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1881 0.0 43.913    
cufflinks 13.4652 0.0 36.205    
cufflinks 24.2365 0.0 68.3295 High  
cufflinks 15.7115 0.0 42.586    
cufflinks 12.3439 0.0 33.0713    
cufflinks 52.212 0.0 163.811 High High
cufflinks 9.51019 0.0 25.3721   Low
cufflinks 14.6092 0.0 39.4608    
cufflinks 16.0072 0.0 43.4179    
cufflinks 4.412        
cufflinks 7.543     High  
cufflinks 5.622        
cufflinks 6.415        
cufflinks 3.081       Low
cufflinks 5.734     High  
cufflinks 5.797        
cufflinks 4.75        
cufflinks 4.299       Low
cufflinks 5.549        
cufflinks 7.362     High  
cufflinks 6.953     High  
cufflinks 6.465        
cufflinks 3.91       Low
cufflinks 8.94     High High
cufflinks 6.39        
cufflinks 7.717     High High

0 Strain