Gene : Cagra.1317s0028 C. grandiflora v1.1
Defline:  (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  28
Name:  ? Cagra.1317s0028 Secondary Identifier:  ? PAC:28910464
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0028 0.5kb upstream 0.5kb upstream 1495 true Scaffold1317: 106065-107559 Capsella grandiflora
Cagra.1317s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 106065-106564 Capsella grandiflora
Cagra.1317s0028 0.5kb downstream 0.5kb downstream 1495 true Scaffold1317: 106565-108059 Capsella grandiflora
Cagra.1317s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 107560-108059 Capsella grandiflora
Cagra.1317s0028 1.0kb upstream 1.0kb upstream 1995 true Scaffold1317: 105565-107559 Capsella grandiflora
Cagra.1317s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 105565-106564 Capsella grandiflora
Cagra.1317s0028 1.0kb downstream 1.0kb downstream 1995 true Scaffold1317: 106565-108559 Capsella grandiflora
Cagra.1317s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 107560-108559 Capsella grandiflora
Cagra.1317s0028 2.0kb upstream 2.0kb upstream 2995 true Scaffold1317: 104565-107559 Capsella grandiflora
Cagra.1317s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 104565-106564 Capsella grandiflora
Cagra.1317s0028 2.0kb downstream 2.0kb downstream 2995 true Scaffold1317: 106565-109559 Capsella grandiflora
Cagra.1317s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 107560-109559 Capsella grandiflora
Cagra.1317s0028 5.0kb upstream 5.0kb upstream 5995 true Scaffold1317: 101565-107559 Capsella grandiflora
Cagra.1317s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 101565-106564 Capsella grandiflora
Cagra.1317s0028 5.0kb downstream 5.0kb downstream 5995 true Scaffold1317: 106565-112559 Capsella grandiflora
Cagra.1317s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 107560-112559 Capsella grandiflora
Cagra.1317s0028 10.0kb upstream 10.0kb upstream 10995 true Scaffold1317: 96565-107559 Capsella grandiflora
Cagra.1317s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 96565-106564 Capsella grandiflora
Cagra.1317s0028 10.0kb downstream 10.0kb downstream 10995 true Scaffold1317: 106565-117559 Capsella grandiflora
Cagra.1317s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 107560-117559 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343112 5261 Brassicaceae View MSA
123839350 5264 Brassicales-Malvales View MSA
124340932 5266 SBM View MSA
124238138 5268 Malvidae View MSA
124062704 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain