Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 122793597

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  187

187 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30094.t000010 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) R. communis v0.1 2977   30094: 110928-113904
29633.t000001 (1 of 173) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) R. communis v0.1 1038   29633: 2201-3238
29154.t000005 (1 of 173) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) R. communis v0.1 345   29154: 33524-33868
Cucsa.109630 (1 of 163) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sativus v1.0 1510   scaffold00934: 542536-544045
Cucsa.309370 (1 of 163) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sativus v1.0 1556   scaffold02980: 103388-104943
Cucsa.345780 (1 of 6) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) C. sativus v1.0 2238   scaffold03443: 62811-65048
orange1.1g033984m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1157   scaffold06838: 1522-2678
AT4G13860 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 562   Chr4: 8022601-8023162
AT4G39260 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 CCR1 1181   Chr4: 18273899-18275079
AT3G26420 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 ATRZ-1A 4489   Chr3: 9671517-9676005
AT2G21660 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 GRP7 1145   Chr2: 9265249-9266393
Thhalv10000386m.g (1 of 3) PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A E. salsugineum v1.0 1250   scaffold_15: 355014-356263
Thhalv10004793m.g (1 of 10) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) E. salsugineum v1.0 2071   scaffold_6: 6415720-6417790
Ciclev10029787m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 785   scaffold_8: 23136753-23137537
Lus10023569.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 821   scaffold1216: 845548-846368
Lus10042321.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 892   scaffold123: 1678766-1679657
Lus10042320.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 810   scaffold123: 1675912-1676721
Lus10020953.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1278   scaffold3: 19466-20743
Lus10026343.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 831   scaffold898: 712895-713725
Lus10026344.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 772   scaffold898: 715458-716229
Gorai.001G074700 (1 of 1) KOG0121//KOG4207 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Predicted splicing factor, SR protein superfamily G. raimondii v2.1 4423   Chr01: 7640275-7644697
Gorai.001G157100 (1 of 5) PTHR10352 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G G. raimondii v2.1 404   Chr01: 22410430-22410833
Gorai.001G190800 (1 of 4) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN G. raimondii v2.1 619   Chr01: 31615281-31615899
Gorai.002G138600 (1 of 310) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. raimondii v2.1 2238   Chr02: 23552593-23554830
Gorai.013G036800 (1 of 310) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. raimondii v2.1 1221   Chr13: 2909216-2910436
Gorai.008G193200 (1 of 10) KOG4207 - Predicted splicing factor, SR protein superfamily G. raimondii v2.1 4623   Chr08: 47725215-47729837
Thecc1EG006886 (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) T. cacao v1.1 1086   scaffold_2: 4284115-4285200
Thecc1EG014006 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) T. cacao v1.1 3469   scaffold_3: 19183328-19186796
Thecc1EG016127 (1 of 3) K03248 - translation initiation factor 3 subunit G (EIF3G) T. cacao v1.1 1173   scaffold_3: 31420273-31421445
Thecc1EG041891 (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) T. cacao v1.1 2416   scaffold_9: 39980303-39982718

187 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29633.m000882 R. communis v0.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5272 Eudicot
30094.m000674 R. communis v0.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5272 Eudicot
Cucsa.345780.1 C. sativus v1.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5272 Eudicot
orange1.1g033984m C. sinensis v1.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5272 Eudicot
Ciclev10029787m C. clementina v1.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5272 Eudicot
Lus10026344 L. usitatissimum v1.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 6 5272 Eudicot
Gorai.001G074700.1 G. raimondii v2.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 6 5272 Eudicot
Thecc1EG014006t2 T. cacao v1.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5272 Eudicot
Araha.29736s0001.1.p A. halleri v1.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5272 Eudicot
Araha.2561s0002.1.p A. halleri v1.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5272 Eudicot
Cagra.2374s0022.1.p C. grandiflora v1.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 5 5272 Eudicot
Migut.D02118.1.p M. guttatus v2.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5272 Eudicot
Migut.C00994.1.p M. guttatus v2.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5272 Eudicot
Glyma.04G012700.1.p G. max Wm82.a2.v1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 10 5272 Eudicot
Glyma.13G026200.1.p G. max Wm82.a2.v1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 10 5272 Eudicot
Glyma.12G065000.1.p G. max Wm82.a2.v1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 10 5272 Eudicot
Brara.B03236.1.p B. rapa FPsc v1.3 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 7 5272 Eudicot
Brara.C01066.1.p B. rapa FPsc v1.3 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 7 5272 Eudicot
Bostr.0556s0314.1.p B. stricta v1.2 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 6 5272 Eudicot
Medtr3g080160.1 M. truncatula Mt4.0v1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 5 5272 Eudicot
Medtr4g063560.1 M. truncatula Mt4.0v1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 5 5272 Eudicot
SapurV1A.1439s0010.1.p S. purpurea v1.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 7 5272 Eudicot
Eucgr.J02065.1.p E. grandis v2.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5272 Eudicot
Eucgr.L03666.1.p E. grandis v2.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5272 Eudicot
Eucgr.G00661.1.p E. grandis v2.0 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5272 Eudicot
Prupe.6G082400.1.p P. persica v2.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 6 5272 Eudicot
Prupe.1G291300.1.p P. persica v2.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 6 5272 Eudicot
Manes.11G133500.1.p M. esculenta v6.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 5 5272 Eudicot
Kalax.0455s0004.1.p K. laxiflora v1.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 8 5272 Eudicot
Kalax.1031s0014.1.p K. laxiflora v1.1 122793597 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 8 5272 Eudicot