Gene : Thecc1EG041891 T. cacao v1.1
Defline:  (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  3211
Name:  ? Thecc1EG041891 Secondary Identifier:  ? PAC:27427726
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041891 0.5kb upstream 0.5kb upstream 2916 true scaffold_9: 39979803-39982718 Theobroma cacao
Thecc1EG041891 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39979803-39980302 Theobroma cacao
Thecc1EG041891 0.5kb downstream 0.5kb downstream 2916 true scaffold_9: 39980303-39983218 Theobroma cacao
Thecc1EG041891 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39982719-39983218 Theobroma cacao
Thecc1EG041891 1.0kb upstream 1.0kb upstream 3416 true scaffold_9: 39979303-39982718 Theobroma cacao
Thecc1EG041891 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39979303-39980302 Theobroma cacao
Thecc1EG041891 1.0kb downstream 1.0kb downstream 3416 true scaffold_9: 39980303-39983718 Theobroma cacao
Thecc1EG041891 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39982719-39983718 Theobroma cacao
Thecc1EG041891 2.0kb upstream 2.0kb upstream 4416 true scaffold_9: 39978303-39982718 Theobroma cacao
Thecc1EG041891 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39978303-39980302 Theobroma cacao
Thecc1EG041891 2.0kb downstream 2.0kb downstream 4416 true scaffold_9: 39980303-39984718 Theobroma cacao
Thecc1EG041891 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39982719-39984718 Theobroma cacao
Thecc1EG041891 5.0kb upstream 5.0kb upstream 7416 true scaffold_9: 39975303-39982718 Theobroma cacao
Thecc1EG041891 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39975303-39980302 Theobroma cacao
Thecc1EG041891 5.0kb downstream 5.0kb downstream 7416 true scaffold_9: 39980303-39987718 Theobroma cacao
Thecc1EG041891 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39982719-39987718 Theobroma cacao
Thecc1EG041891 10.0kb upstream 10.0kb upstream 12416 true scaffold_9: 39970303-39982718 Theobroma cacao
Thecc1EG041891 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39970303-39980302 Theobroma cacao
Thecc1EG041891 10.0kb downstream 10.0kb downstream 12416 true scaffold_9: 39980303-39992718 Theobroma cacao
Thecc1EG041891 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39982719-39992718 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839350 5264 Brassicales-Malvales View MSA
124340932 5266 SBM View MSA
124238138 5268 Malvidae View MSA
124062704 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain