Gene : Thecc1EG006886 T. cacao v1.1
Defline:  (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  810
Name:  ? Thecc1EG006886 Secondary Identifier:  ? PAC:27460116
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006886 0.5kb upstream 0.5kb upstream 1586 true scaffold_2: 4284115-4285700 Theobroma cacao
Thecc1EG006886 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4285201-4285700 Theobroma cacao
Thecc1EG006886 0.5kb downstream 0.5kb downstream 1586 true scaffold_2: 4283615-4285200 Theobroma cacao
Thecc1EG006886 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4283615-4284114 Theobroma cacao
Thecc1EG006886 1.0kb upstream 1.0kb upstream 2086 true scaffold_2: 4284115-4286200 Theobroma cacao
Thecc1EG006886 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4285201-4286200 Theobroma cacao
Thecc1EG006886 1.0kb downstream 1.0kb downstream 2086 true scaffold_2: 4283115-4285200 Theobroma cacao
Thecc1EG006886 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4283115-4284114 Theobroma cacao
Thecc1EG006886 2.0kb upstream 2.0kb upstream 3086 true scaffold_2: 4284115-4287200 Theobroma cacao
Thecc1EG006886 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4285201-4287200 Theobroma cacao
Thecc1EG006886 2.0kb downstream 2.0kb downstream 3086 true scaffold_2: 4282115-4285200 Theobroma cacao
Thecc1EG006886 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4282115-4284114 Theobroma cacao
Thecc1EG006886 5.0kb upstream 5.0kb upstream 6086 true scaffold_2: 4284115-4290200 Theobroma cacao
Thecc1EG006886 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4285201-4290200 Theobroma cacao
Thecc1EG006886 5.0kb downstream 5.0kb downstream 6086 true scaffold_2: 4279115-4285200 Theobroma cacao
Thecc1EG006886 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4279115-4284114 Theobroma cacao
Thecc1EG006886 10.0kb upstream 10.0kb upstream 11086 true scaffold_2: 4284115-4295200 Theobroma cacao
Thecc1EG006886 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4285201-4295200 Theobroma cacao
Thecc1EG006886 10.0kb downstream 10.0kb downstream 11086 true scaffold_2: 4274115-4285200 Theobroma cacao
Thecc1EG006886 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4274115-4284114 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834253 5264 Brassicales-Malvales View MSA
124321937 5266 SBM View MSA
124250181 5268 Malvidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain