Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 124065859

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  79

79 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30094.t000010 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) R. communis v0.1 2977   30094: 110928-113904
29633.t000001 (1 of 173) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) R. communis v0.1 1038   29633: 2201-3238
Cucsa.109630 (1 of 163) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sativus v1.0 1510   scaffold00934: 542536-544045
Cucsa.345780 (1 of 6) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) C. sativus v1.0 2238   scaffold03443: 62811-65048
AT4G39260 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 CCR1 1181   Chr4: 18273899-18275079
AT3G26420 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 ATRZ-1A 4489   Chr3: 9671517-9676005
AT2G21660 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 GRP7 1145   Chr2: 9265249-9266393
Thhalv10000386m.g (1 of 3) PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A E. salsugineum v1.0 1250   scaffold_15: 355014-356263
Thhalv10004793m.g (1 of 10) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) E. salsugineum v1.0 2071   scaffold_6: 6415720-6417790
Lus10023569.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 821   scaffold1216: 845548-846368
Lus10042321.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 892   scaffold123: 1678766-1679657
Lus10020953.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1278   scaffold3: 19466-20743
Lus10026343.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 831   scaffold898: 712895-713725
Gorai.001G074700 (1 of 1) KOG0121//KOG4207 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Predicted splicing factor, SR protein superfamily G. raimondii v2.1 4423   Chr01: 7640275-7644697
Gorai.013G036800 (1 of 310) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. raimondii v2.1 1221   Chr13: 2909216-2910436
Gorai.008G193200 (1 of 10) KOG4207 - Predicted splicing factor, SR protein superfamily G. raimondii v2.1 4623   Chr08: 47725215-47729837
Thecc1EG006886 (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) T. cacao v1.1 1086   scaffold_2: 4284115-4285200
Thecc1EG014006 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) T. cacao v1.1 3469   scaffold_3: 19183328-19186796
Araha.29736s0001 (1 of 4) KOG4207 - Predicted splicing factor, SR protein superfamily A. halleri v1.1 2778   Scaffold29736: 248-3025
Cagra.0157s0007 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1098   Scaffold157: 21088-22185
Cagra.2374s0022 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1033   Scaffold2374: 60552-61584
Cagra.2381s0007 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 967   Scaffold2381: 22679-23645
Cagra.3514s0003 (1 of 8) KOG4207 - Predicted splicing factor, SR protein superfamily C. grandiflora v1.1 2572   Scaffold3514: 9450-12021
Glyma.05G121100 (1 of 15) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) G. max Wm82.a2.v1 3456   Chr05: 31400610-31404065
Glyma.06G012600 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 1225   Chr06: 927667-928891
Glyma.11G117300 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 1044   Chr11: 8927256-8928299
Glyma.11G117500 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 1104   Chr11: 8932743-8933846
Glyma.04G012700 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 1299   Chr04: 952334-953632
Brara.F03273 (1 of 9) KOG4207 - Predicted splicing factor, SR protein superfamily B. rapa FPsc v1.3 2633   A06: 25653765-25656397
Brara.D01278 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 1056   A04: 11614131-11615186

79 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29633.m000882 R. communis v0.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
30094.m000674 R. communis v0.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
Cucsa.345780.1 C. sativus v1.0 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
Gorai.001G074700.1 G. raimondii v2.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Thecc1EG014006t2 T. cacao v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
Araha.29736s0001.1.p A. halleri v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5270 Rosid
Cagra.2374s0022.1.p C. grandiflora v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5270 Rosid
Glyma.04G012700.1.p G. max Wm82.a2.v1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 5 5270 Rosid
Glyma.06G012600.1.p G. max Wm82.a2.v1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 5 5270 Rosid
Brara.B03236.1.p B. rapa FPsc v1.3 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 5 5270 Rosid
Bostr.0556s0314.1.p B. stricta v1.2 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5270 Rosid
SapurV1A.1439s0010.1.p S. purpurea v1.0 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 6 5270 Rosid
Eucgr.G00661.1.p E. grandis v2.0 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5270 Rosid
AL7G11250.t1 A. lyrata v2.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Tp57577_TGAC_v2_mRNA37395 T. pratense v2 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Tp57577_TGAC_v2_mRNA20090 T. pratense v2 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Phvul.009G023700.1.p P. vulgaris v2.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Phvul.011G045000.1.p P. vulgaris v2.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Potri.009G116400.1.p P. trichocarpa v3.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Potri.001G207100.1.p P. trichocarpa v3.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Podel.04G159200.1.p P. deltoides WV94 v2.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
Carub.0005s0439.1.p C. rubella v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5270 Rosid
Carub.0007s0118.1.p C. rubella v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5270 Rosid
Carub.0004s0071.1.p C. rubella v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5270 Rosid
MD10G1075500 M. domestica v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
MD12G1223200 M. domestica v1.1 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5270 Rosid
Ca_15370 C. arietinum v1.0 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
Ca_15369 C. arietinum v1.0 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
gene22297-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid
Cucsa.109630.1 C. sativus v1.0 124065859 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5270 Rosid