Gene : Glyma.11G117300 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1173
Name:  ? Glyma.11G117300 Secondary Identifier:  ? PAC:30527983
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G117300 0.5kb upstream 0.5kb upstream 1544 true Chr11: 8927256-8928799 Glycine max
Glyma.11G117300 0.5kb upstream 0.5kb upstream 500 false Chr11: 8928300-8928799 Glycine max
Glyma.11G117300 0.5kb downstream 0.5kb downstream 1544 true Chr11: 8926756-8928299 Glycine max
Glyma.11G117300 0.5kb downstream 0.5kb downstream 500 false Chr11: 8926756-8927255 Glycine max
Glyma.11G117300 1.0kb upstream 1.0kb upstream 2044 true Chr11: 8927256-8929299 Glycine max
Glyma.11G117300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8928300-8929299 Glycine max
Glyma.11G117300 1.0kb downstream 1.0kb downstream 2044 true Chr11: 8926256-8928299 Glycine max
Glyma.11G117300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8926256-8927255 Glycine max
Glyma.11G117300 2.0kb upstream 2.0kb upstream 3044 true Chr11: 8927256-8930299 Glycine max
Glyma.11G117300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8928300-8930299 Glycine max
Glyma.11G117300 2.0kb downstream 2.0kb downstream 3044 true Chr11: 8925256-8928299 Glycine max
Glyma.11G117300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8925256-8927255 Glycine max
Glyma.11G117300 5.0kb upstream 5.0kb upstream 6044 true Chr11: 8927256-8933299 Glycine max
Glyma.11G117300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8928300-8933299 Glycine max
Glyma.11G117300 5.0kb downstream 5.0kb downstream 6044 true Chr11: 8922256-8928299 Glycine max
Glyma.11G117300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8922256-8927255 Glycine max
Glyma.11G117300 10.0kb upstream 10.0kb upstream 11044 true Chr11: 8927256-8938299 Glycine max
Glyma.11G117300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8928300-8938299 Glycine max
Glyma.11G117300 10.0kb downstream 10.0kb downstream 11044 true Chr11: 8917256-8928299 Glycine max
Glyma.11G117300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8917256-8927255 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298687 5265 Fabidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 264.083 0.0 830.19 High  
cufflinks 261.011 0.0 807.604 High  
cufflinks 224.433 0.0 676.344 High  
cufflinks 208.039 0.0 623.789 High Low
cufflinks 491.603 0.0 1795.66 High High
cufflinks 461.835 0.0 1639.77 High  
cufflinks 226.113 0.0 694.944 High  
cufflinks 682.127 0.0 2651.49 High High
cufflinks 317.079 0.0 1028.43 High  
cufflinks 525.153     High  
cufflinks 127.514     High Low
cufflinks 256.898     High  
cufflinks 714.706     High High
cufflinks 851.603     High High
cufflinks 125.068     High Low
cufflinks 402.552     High  
cufflinks 382.83     High  
cufflinks 357.223     High  
cufflinks 415.255     High  
cufflinks 268.978     High  
cufflinks 155.029     High Low
cufflinks 362.213     High  
cufflinks 422.472     High  
cufflinks 193.326     High  
cufflinks 313.871     High  
cufflinks 267.796     High  

0 Strain