Gene : Cagra.0157s0007 C. grandiflora v1.1
Defline:  (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  7
Name:  ? Cagra.0157s0007 Secondary Identifier:  ? PAC:28915963
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0157s0007 0.5kb upstream 0.5kb upstream 1598 true Scaffold157: 21088-22685 Capsella grandiflora
Cagra.0157s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold157: 22186-22685 Capsella grandiflora
Cagra.0157s0007 0.5kb downstream 0.5kb downstream 1598 true Scaffold157: 20588-22185 Capsella grandiflora
Cagra.0157s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold157: 20588-21087 Capsella grandiflora
Cagra.0157s0007 1.0kb upstream 1.0kb upstream 2098 true Scaffold157: 21088-23185 Capsella grandiflora
Cagra.0157s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold157: 22186-23185 Capsella grandiflora
Cagra.0157s0007 1.0kb downstream 1.0kb downstream 2098 true Scaffold157: 20088-22185 Capsella grandiflora
Cagra.0157s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold157: 20088-21087 Capsella grandiflora
Cagra.0157s0007 2.0kb upstream 2.0kb upstream 3098 true Scaffold157: 21088-24185 Capsella grandiflora
Cagra.0157s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold157: 22186-24185 Capsella grandiflora
Cagra.0157s0007 2.0kb downstream 2.0kb downstream 3098 true Scaffold157: 19088-22185 Capsella grandiflora
Cagra.0157s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold157: 19088-21087 Capsella grandiflora
Cagra.0157s0007 5.0kb upstream 5.0kb upstream 6098 true Scaffold157: 21088-27185 Capsella grandiflora
Cagra.0157s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold157: 22186-27185 Capsella grandiflora
Cagra.0157s0007 5.0kb downstream 5.0kb downstream 6098 true Scaffold157: 16088-22185 Capsella grandiflora
Cagra.0157s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold157: 16088-21087 Capsella grandiflora
Cagra.0157s0007 10.0kb upstream 10.0kb upstream 11098 true Scaffold157: 21088-32185 Capsella grandiflora
Cagra.0157s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold157: 22186-32185 Capsella grandiflora
Cagra.0157s0007 10.0kb downstream 10.0kb downstream 11098 true Scaffold157: 11088-22185 Capsella grandiflora
Cagra.0157s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold157: 11088-21087 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379594 5261 Brassicaceae View MSA
123834253 5264 Brassicales-Malvales View MSA
124321937 5266 SBM View MSA
124250181 5268 Malvidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain