Gene : Glyma.04G012700 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  127
Name:  ? Glyma.04G012700 Secondary Identifier:  ? PAC:30489437
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G012700 0.5kb upstream 0.5kb upstream 1799 true Chr04: 952334-954132 Glycine max
Glyma.04G012700 0.5kb upstream 0.5kb upstream 500 false Chr04: 953633-954132 Glycine max
Glyma.04G012700 0.5kb downstream 0.5kb downstream 1799 true Chr04: 951834-953632 Glycine max
Glyma.04G012700 0.5kb downstream 0.5kb downstream 500 false Chr04: 951834-952333 Glycine max
Glyma.04G012700 1.0kb upstream 1.0kb upstream 2299 true Chr04: 952334-954632 Glycine max
Glyma.04G012700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 953633-954632 Glycine max
Glyma.04G012700 1.0kb downstream 1.0kb downstream 2299 true Chr04: 951334-953632 Glycine max
Glyma.04G012700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 951334-952333 Glycine max
Glyma.04G012700 2.0kb upstream 2.0kb upstream 3299 true Chr04: 952334-955632 Glycine max
Glyma.04G012700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 953633-955632 Glycine max
Glyma.04G012700 2.0kb downstream 2.0kb downstream 3299 true Chr04: 950334-953632 Glycine max
Glyma.04G012700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 950334-952333 Glycine max
Glyma.04G012700 5.0kb upstream 5.0kb upstream 6299 true Chr04: 952334-958632 Glycine max
Glyma.04G012700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 953633-958632 Glycine max
Glyma.04G012700 5.0kb downstream 5.0kb downstream 6299 true Chr04: 947334-953632 Glycine max
Glyma.04G012700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 947334-952333 Glycine max
Glyma.04G012700 10.0kb upstream 10.0kb upstream 11299 true Chr04: 952334-963632 Glycine max
Glyma.04G012700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 953633-963632 Glycine max
Glyma.04G012700 10.0kb downstream 10.0kb downstream 11299 true Chr04: 942334-953632 Glycine max
Glyma.04G012700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 942334-952333 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122248897 5265 Fabidae Singleton cluster - no MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 201.462 0.0 644.423 High High
cufflinks 63.0375 0.0 171.537 High Low
cufflinks 149.071 0.0 448.379 High  
cufflinks 105.162 0.0 301.743 High  
cufflinks 146.045 0.0 443.152 High  
cufflinks 87.1992 0.0 245.361 High Low
cufflinks 137.808 0.0 413.347 High  
cufflinks 158.925 0.0 481.52 High  
cufflinks 179.948 0.0 560.422 High  
cufflinks 119.187     High  
cufflinks 232.311     High  
cufflinks 218.347     High  
cufflinks 80.998     High Low
cufflinks 107.435     High  
cufflinks 175.627     High  
cufflinks 120.751     High  
cufflinks 174.176     High  
cufflinks 280.795     High High
cufflinks 63.431     High Low
cufflinks 203.171     High  
cufflinks 352.594     High High
cufflinks 209.797     High  
cufflinks 126.32     High  
cufflinks 260.588     High  
cufflinks 128.887     High  
cufflinks 262.143     High  

0 Strain