Gene : Glyma.05G121100 G. max Wm82.a2.v1
Defline:  (1 of 15) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) Genomic Order:  1211
Name:  ? Glyma.05G121100 Secondary Identifier:  ? PAC:30525380
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G121100 0.5kb upstream 0.5kb upstream 3956 true Chr05: 31400110-31404065 Glycine max
Glyma.05G121100 0.5kb upstream 0.5kb upstream 500 false Chr05: 31400110-31400609 Glycine max
Glyma.05G121100 0.5kb downstream 0.5kb downstream 3956 true Chr05: 31400610-31404565 Glycine max
Glyma.05G121100 0.5kb downstream 0.5kb downstream 500 false Chr05: 31404066-31404565 Glycine max
Glyma.05G121100 1.0kb upstream 1.0kb upstream 4456 true Chr05: 31399610-31404065 Glycine max
Glyma.05G121100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31399610-31400609 Glycine max
Glyma.05G121100 1.0kb downstream 1.0kb downstream 4456 true Chr05: 31400610-31405065 Glycine max
Glyma.05G121100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31404066-31405065 Glycine max
Glyma.05G121100 2.0kb upstream 2.0kb upstream 5456 true Chr05: 31398610-31404065 Glycine max
Glyma.05G121100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31398610-31400609 Glycine max
Glyma.05G121100 2.0kb downstream 2.0kb downstream 5456 true Chr05: 31400610-31406065 Glycine max
Glyma.05G121100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31404066-31406065 Glycine max
Glyma.05G121100 5.0kb upstream 5.0kb upstream 8456 true Chr05: 31395610-31404065 Glycine max
Glyma.05G121100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31395610-31400609 Glycine max
Glyma.05G121100 5.0kb downstream 5.0kb downstream 8456 true Chr05: 31400610-31409065 Glycine max
Glyma.05G121100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31404066-31409065 Glycine max
Glyma.05G121100 10.0kb upstream 10.0kb upstream 13456 true Chr05: 31390610-31404065 Glycine max
Glyma.05G121100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31390610-31400609 Glycine max
Glyma.05G121100 10.0kb downstream 10.0kb downstream 13456 true Chr05: 31400610-31414065 Glycine max
Glyma.05G121100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31404066-31414065 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300776 5265 Fabidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7897 0.0 55.6923    
cufflinks 24.4159 0.0 65.8249 High  
cufflinks 14.2067 0.0 37.9096   Low
cufflinks 16.4561 0.0 43.9081   Low
cufflinks 27.6855 0.0 75.0819 High  
cufflinks 22.461 0.0 60.3512    
cufflinks 39.0969 0.0 108.979 High High
cufflinks 25.9919 0.0 70.2555 High  
cufflinks 19.4132 0.0 51.9253    
cufflinks 18.209     High  
cufflinks 27.817     High  
cufflinks 12.768     High Low
cufflinks 25.058     High  
cufflinks 29.353     High High
cufflinks 28.715     High High
cufflinks 22.459     High  
cufflinks 17.99     High  
cufflinks 14.279     High Low
cufflinks 24.113     High  
cufflinks 21.683     High  
cufflinks 25.937     High  
cufflinks 21.278     High  
cufflinks 19.955     High  
cufflinks 29.528     High High
cufflinks 23.436     High  
cufflinks 20.7     High  

0 Strain