Gene : Glyma.06G012600 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  126
Name:  ? Glyma.06G012600 Secondary Identifier:  ? PAC:30551054
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G012600 0.5kb upstream 0.5kb upstream 1725 true Chr06: 927667-929391 Glycine max
Glyma.06G012600 0.5kb upstream 0.5kb upstream 500 false Chr06: 928892-929391 Glycine max
Glyma.06G012600 0.5kb downstream 0.5kb downstream 1725 true Chr06: 927167-928891 Glycine max
Glyma.06G012600 0.5kb downstream 0.5kb downstream 500 false Chr06: 927167-927666 Glycine max
Glyma.06G012600 1.0kb upstream 1.0kb upstream 2225 true Chr06: 927667-929891 Glycine max
Glyma.06G012600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 928892-929891 Glycine max
Glyma.06G012600 1.0kb downstream 1.0kb downstream 2225 true Chr06: 926667-928891 Glycine max
Glyma.06G012600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 926667-927666 Glycine max
Glyma.06G012600 2.0kb upstream 2.0kb upstream 3225 true Chr06: 927667-930891 Glycine max
Glyma.06G012600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 928892-930891 Glycine max
Glyma.06G012600 2.0kb downstream 2.0kb downstream 3225 true Chr06: 925667-928891 Glycine max
Glyma.06G012600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 925667-927666 Glycine max
Glyma.06G012600 5.0kb upstream 5.0kb upstream 6225 true Chr06: 927667-933891 Glycine max
Glyma.06G012600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 928892-933891 Glycine max
Glyma.06G012600 5.0kb downstream 5.0kb downstream 6225 true Chr06: 922667-928891 Glycine max
Glyma.06G012600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 922667-927666 Glycine max
Glyma.06G012600 10.0kb upstream 10.0kb upstream 11225 true Chr06: 927667-938891 Glycine max
Glyma.06G012600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 928892-938891 Glycine max
Glyma.06G012600 10.0kb downstream 10.0kb downstream 11225 true Chr06: 917667-928891 Glycine max
Glyma.06G012600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 917667-927666 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313595 5265 Fabidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 227.465 0.0 1165.6 High High
cufflinks 24.6381 0.0 92.517 High Low
cufflinks 142.925 0.0 584.296 High  
cufflinks 104.179 0.0 442.959 High  
cufflinks 119.514 0.0 479.925 High  
cufflinks 194.77 0.0 920.979 High  
cufflinks 97.2542 0.0 411.845 High  
cufflinks 149.128 0.0 619.767 High  
cufflinks 143.024 0.0 597.813 High  
cufflinks 33.403     High  
cufflinks 60.197     High High
cufflinks 46.459     High  
cufflinks 20.741     High  
cufflinks 25.939     High  
cufflinks 29.944     High  
cufflinks 12.15     High Low
cufflinks 48.105     High  
cufflinks 45.151     High  
cufflinks 6.136       Low
cufflinks 15.359     High  
cufflinks 55.87     High  
cufflinks 19.768     High  
cufflinks 11.895     High Low
cufflinks 82.708     High High
cufflinks 14.015     High  
cufflinks 50.173     High  

0 Strain