Gene : Cagra.1216s0020 C. grandiflora v1.1
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  20
Name:  ? Cagra.1216s0020 Secondary Identifier:  ? PAC:28916742
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLYCLEAV-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1216s0020 0.5kb upstream 0.5kb upstream 4240 true Scaffold1216: 69159-73398 Capsella grandiflora
Cagra.1216s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1216: 72899-73398 Capsella grandiflora
Cagra.1216s0020 0.5kb downstream 0.5kb downstream 4240 true Scaffold1216: 68659-72898 Capsella grandiflora
Cagra.1216s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1216: 68659-69158 Capsella grandiflora
Cagra.1216s0020 1.0kb upstream 1.0kb upstream 4740 true Scaffold1216: 69159-73898 Capsella grandiflora
Cagra.1216s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1216: 72899-73898 Capsella grandiflora
Cagra.1216s0020 1.0kb downstream 1.0kb downstream 4740 true Scaffold1216: 68159-72898 Capsella grandiflora
Cagra.1216s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1216: 68159-69158 Capsella grandiflora
Cagra.1216s0020 2.0kb upstream 2.0kb upstream 5740 true Scaffold1216: 69159-74898 Capsella grandiflora
Cagra.1216s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1216: 72899-74898 Capsella grandiflora
Cagra.1216s0020 2.0kb downstream 2.0kb downstream 5740 true Scaffold1216: 67159-72898 Capsella grandiflora
Cagra.1216s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1216: 67159-69158 Capsella grandiflora
Cagra.1216s0020 5.0kb upstream 5.0kb upstream 8740 true Scaffold1216: 69159-77898 Capsella grandiflora
Cagra.1216s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1216: 72899-77898 Capsella grandiflora
Cagra.1216s0020 5.0kb downstream 5.0kb downstream 8740 true Scaffold1216: 64159-72898 Capsella grandiflora
Cagra.1216s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1216: 64159-69158 Capsella grandiflora
Cagra.1216s0020 10.0kb upstream 10.0kb upstream 10293 true Scaffold1216: 69159-79451 Capsella grandiflora
Cagra.1216s0020 10.0kb upstream 10.0kb upstream 6553 false Scaffold1216: 72899-79451 Capsella grandiflora
Cagra.1216s0020 10.0kb downstream 10.0kb downstream 13740 true Scaffold1216: 59159-72898 Capsella grandiflora
Cagra.1216s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1216: 59159-69158 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367907 5261 Brassicaceae View MSA
123829010 5264 Brassicales-Malvales View MSA
124339794 5266 SBM View MSA
124244031 5268 Malvidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain