Gene : Cagra.1383s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE Genomic Order:  2
Name:  ? Cagra.1383s0002 Secondary Identifier:  ? PAC:28901788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0002 0.5kb upstream 0.5kb upstream 3735 true Scaffold1383: 8824-12558 Capsella grandiflora
Cagra.1383s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 12059-12558 Capsella grandiflora
Cagra.1383s0002 0.5kb downstream 0.5kb downstream 3735 true Scaffold1383: 8324-12058 Capsella grandiflora
Cagra.1383s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 8324-8823 Capsella grandiflora
Cagra.1383s0002 1.0kb upstream 1.0kb upstream 4235 true Scaffold1383: 8824-13058 Capsella grandiflora
Cagra.1383s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 12059-13058 Capsella grandiflora
Cagra.1383s0002 1.0kb downstream 1.0kb downstream 4235 true Scaffold1383: 7824-12058 Capsella grandiflora
Cagra.1383s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 7824-8823 Capsella grandiflora
Cagra.1383s0002 2.0kb upstream 2.0kb upstream 5235 true Scaffold1383: 8824-14058 Capsella grandiflora
Cagra.1383s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 12059-14058 Capsella grandiflora
Cagra.1383s0002 2.0kb downstream 2.0kb downstream 5235 true Scaffold1383: 6824-12058 Capsella grandiflora
Cagra.1383s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 6824-8823 Capsella grandiflora
Cagra.1383s0002 5.0kb upstream 5.0kb upstream 8235 true Scaffold1383: 8824-17058 Capsella grandiflora
Cagra.1383s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 12059-17058 Capsella grandiflora
Cagra.1383s0002 5.0kb downstream 5.0kb downstream 8235 true Scaffold1383: 3824-12058 Capsella grandiflora
Cagra.1383s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 3824-8823 Capsella grandiflora
Cagra.1383s0002 10.0kb upstream 10.0kb upstream 13235 true Scaffold1383: 8824-22058 Capsella grandiflora
Cagra.1383s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 12059-22058 Capsella grandiflora
Cagra.1383s0002 10.0kb downstream 10.0kb downstream 12058 true Scaffold1383: 1-12058 Capsella grandiflora
Cagra.1383s0002 10.0kb downstream 10.0kb downstream 8823 false Scaffold1383: 1-8823 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368006 5261 Brassicaceae View MSA
123830586 5264 Brassicales-Malvales View MSA
124340796 5266 SBM View MSA
124237695 5268 Malvidae View MSA
124064781 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain