Gene : Cagra.1787s0005 C. grandiflora v1.1
Defline:  (1 of 6) PF13650 - Aspartyl protease (Asp_protease_2) Genomic Order:  5
Name:  ? Cagra.1787s0005 Secondary Identifier:  ? PAC:28914731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1787s0005 0.5kb upstream 0.5kb upstream 1388 true Scaffold1787: 34293-35680 Capsella grandiflora
Cagra.1787s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1787: 34293-34792 Capsella grandiflora
Cagra.1787s0005 0.5kb downstream 0.5kb downstream 1388 true Scaffold1787: 34793-36180 Capsella grandiflora
Cagra.1787s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1787: 35681-36180 Capsella grandiflora
Cagra.1787s0005 1.0kb upstream 1.0kb upstream 1888 true Scaffold1787: 33793-35680 Capsella grandiflora
Cagra.1787s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1787: 33793-34792 Capsella grandiflora
Cagra.1787s0005 1.0kb downstream 1.0kb downstream 1888 true Scaffold1787: 34793-36680 Capsella grandiflora
Cagra.1787s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1787: 35681-36680 Capsella grandiflora
Cagra.1787s0005 2.0kb upstream 2.0kb upstream 2888 true Scaffold1787: 32793-35680 Capsella grandiflora
Cagra.1787s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1787: 32793-34792 Capsella grandiflora
Cagra.1787s0005 2.0kb downstream 2.0kb downstream 2888 true Scaffold1787: 34793-37680 Capsella grandiflora
Cagra.1787s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1787: 35681-37680 Capsella grandiflora
Cagra.1787s0005 5.0kb upstream 5.0kb upstream 5888 true Scaffold1787: 29793-35680 Capsella grandiflora
Cagra.1787s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1787: 29793-34792 Capsella grandiflora
Cagra.1787s0005 5.0kb downstream 5.0kb downstream 5888 true Scaffold1787: 34793-40680 Capsella grandiflora
Cagra.1787s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1787: 35681-40680 Capsella grandiflora
Cagra.1787s0005 10.0kb upstream 10.0kb upstream 10888 true Scaffold1787: 24793-35680 Capsella grandiflora
Cagra.1787s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1787: 24793-34792 Capsella grandiflora
Cagra.1787s0005 10.0kb downstream 10.0kb downstream 10888 true Scaffold1787: 34793-45680 Capsella grandiflora
Cagra.1787s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1787: 35681-45680 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334583 5261 Brassicaceae View MSA
123775401 5264 Brassicales-Malvales View MSA
124273811 5266 SBM View MSA
124129363 5268 Malvidae View MSA
124074296 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain