31 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| Thhalv10015409m.g | (1 of 1) PF00098//PF03732//PF13975 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) // gag-polyprotein putative aspartyl protease (gag-asp_proteas) | E. salsugineum v1.0 |
1104
 |
scaffold_2: 17165621-17166724 | |
| Thhalv10012229m.g | (1 of 1) PF00098//PF03732//PF13650 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) // Aspartyl protease (Asp_protease_2) | E. salsugineum v1.0 |
1149
|
scaffold_7: 971399-972547 | |
| Thecc1EG003127 | (1 of 6) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | T. cacao v1.1 |
2365
|
scaffold_1: 19469134-19471498 | |
| Thecc1EG005914 | (1 of 16) PF00098//PF03732 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
15071
|
scaffold_1: 38762457-38777527 | |
| Thecc1EG043155 | (1 of 22) PF00098//PF03732 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
6843
|
scaffold_10r: 4253516-4260358 | |
| Thecc1EG022738 | (1 of 102) PF00098 - Zinc knuckle (zf-CCHC) | T. cacao v1.1 |
5686
|
scaffold_5: 7048528-7054213 | |
| Thecc1EG023754 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
2222
|
scaffold_5: 18076776-18078997 | |
| Thecc1EG025656 | (1 of 16) PF00098//PF03732 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
1616
|
scaffold_5: 33964149-33965764 | |
| Thecc1EG036314 | (1 of 6) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | T. cacao v1.1 |
2211
|
scaffold_8: 18065123-18067333 | |
| Cagra.0327s0007 | (1 of 1) PF00098//PF13650 - Zinc knuckle (zf-CCHC) // Aspartyl protease (Asp_protease_2) | C. grandiflora v1.1 |
909
|
Scaffold327: 52386-53294 | |
| Cagra.1787s0005 | (1 of 6) PF13650 - Aspartyl protease (Asp_protease_2) | C. grandiflora v1.1 |
888
|
Scaffold1787: 34793-35680 | |
| Cagra.11302s0001 | (1 of 2) PF00098//PF03732 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) | C. grandiflora v1.1 |
919
|
Scaffold11302: 6976-7894 | |
| Cagra.28063s0002 | C. grandiflora v1.1 |
934
|
Scaffold28063: 10640-11573 | ||
| Cagra.28935s0001 | (1 of 1) PF00098//PF03732//PF13650 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) // Aspartyl protease (Asp_protease_2) | C. grandiflora v1.1 |
1781
|
Scaffold28935: 2072-3852 | |
| Cagra.3910s0004 | (1 of 2) PF00098//PF03732 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) | C. grandiflora v1.1 |
852
|
Scaffold3910: 29164-30015 | |
| Medtr4g102460 | (1 of 2) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | M. truncatula Mt4.0v1 |
2014
|
chr4: 42468799-42470812 | |
| Medtr7g105270 | (1 of 2) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | M. truncatula Mt4.0v1 |
1542
|
chr7: 42678938-42680479 | |
| SapurV1A.0455s0080 | (1 of 55) PF00098 - Zinc knuckle (zf-CCHC) | S. purpurea v1.0 |
598
|
chr07: 3725870-3726467 | |
| SapurV1A.0185s0250 | (1 of 8) PTHR22847//PTHR22847:SF430 - WD40 REPEAT PROTEIN // MZB10.11 PROTEIN-RELATED | S. purpurea v1.0 |
1410
|
chr04: 6712554-6713963 | |
| Prupe.7G034800 | (1 of 1) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | P. persica v2.1 |
1385
|
Pp07: 6450141-6451525 | |
| Prupe.5G246300 | (1 of 3) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | P. persica v2.1 |
2838
|
Pp05: 18412280-18415117 | |
| Tp57577_TGAC_v2_gene29747 | (1 of 1) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | T. pratense v2 |
3149
|
Tp57577_TGAC_v2_scaf_761: 54506-57654 | |
| Podel.04G128800 | (1 of 41) PF00098 - Zinc knuckle (zf-CCHC) | P. deltoides WV94 v2.1 |
609
|
Chr04: 12749347-12749955 | |
| Podel.07G082800 | P. deltoides WV94 v2.1 |
1762
|
Chr07: 10029034-10030795 | ||
| Podel.12G016200 | P. deltoides WV94 v2.1 |
554
|
Chr12: 1394158-1394711 | ||
| Podel.01G396800 | (1 of 41) PF00098 - Zinc knuckle (zf-CCHC) | P. deltoides WV94 v2.1 |
477
|
Chr01: 41940253-41940729 | |
| VIT_207s0031g00150 | (1 of 3) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | V. vinifera v2.1 |
822
|
chr7: 16374414-16375235 | |
| VIT_214s0036g01410 | (1 of 3) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | V. vinifera v2.1 |
894
|
chr14: 12581386-12582279 | |
| VIT_200s0227g00030 | (1 of 3) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | V. vinifera v2.1 |
1276
|
chrUn: 14978583-14979858 | |
| gene29206-v2.0.a2-hybrid | (1 of 4) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | F. vesca v2.0.a2 |
2311
|
Fvb5: 18704309-18706619 |
31 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| Thhalv10012229m | E. salsugineum v1.0 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| Thecc1EG022738t1 | T. cacao v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 7 | 5270 | Rosid |
| Thecc1EG023754t1 | T. cacao v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 7 | 5270 | Rosid |
| Cagra.28935s0001.1.p | C. grandiflora v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 6 | 5270 | Rosid |
| Cagra.3910s0004.1.p | C. grandiflora v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 6 | 5270 | Rosid |
| Cagra.1787s0005.1.p | C. grandiflora v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 6 | 5270 | Rosid |
| Medtr7g105270.1 | M. truncatula Mt4.0v1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| SapurV1A.0455s0080.1.p | S. purpurea v1.0 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| Prupe.7G034800.1.p | P. persica v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| Podel.12G016200.1.p | P. deltoides WV94 v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 4 | 5270 | Rosid |
| Podel.01G396800.1.p | P. deltoides WV94 v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 4 | 5270 | Rosid |
| gene29206-v2.0.a2-hybrid.t1 | F. vesca v2.0.a2 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| gene29238-v1.0-hybrid.t1 | F. vesca v2.0.a2 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| Thhalv10015409m | E. salsugineum v1.0 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| Thecc1EG036314t1 | T. cacao v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 7 | 5270 | Rosid |
| Thecc1EG043155t1 | T. cacao v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 7 | 5270 | Rosid |
| Thecc1EG025656t1 | T. cacao v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 7 | 5270 | Rosid |
| Thecc1EG005914t1 | T. cacao v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 7 | 5270 | Rosid |
| Thecc1EG003127t1 | T. cacao v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 7 | 5270 | Rosid |
| Cagra.11302s0001.1.p | C. grandiflora v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 6 | 5270 | Rosid |
| Cagra.0327s0007.1.p | C. grandiflora v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 6 | 5270 | Rosid |
| Cagra.28063s0002.1.p | C. grandiflora v1.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 6 | 5270 | Rosid |
| Medtr4g102460.1 | M. truncatula Mt4.0v1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| SapurV1A.0185s0250.1.p | S. purpurea v1.0 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| Prupe.5G246300.1.p | P. persica v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 2 | 5270 | Rosid |
| Tp57577_TGAC_v2_mRNA30763 | T. pratense v2 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 1 | 5270 | Rosid |
| Podel.07G082800.1.p | P. deltoides WV94 v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 4 | 5270 | Rosid |
| Podel.04G128800.1.p | P. deltoides WV94 v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 4 | 5270 | Rosid |
| VIT_200s0227g00030.1 | V. vinifera v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 3 | 5270 | Rosid |
| VIT_207s0031g00150.1 | V. vinifera v2.1 | 124074296 | 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | 3 | 5270 | Rosid |
