Gene : Thhalv10012229m.g E. salsugineum v1.0
Defline:  (1 of 1) PF00098//PF03732//PF13650 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) // Aspartyl protease (Asp_protease_2) Genomic Order:  198
Name:  ? Thhalv10012229m.g Secondary Identifier:  ? PAC:20185075
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012229m.g 0.5kb upstream 0.5kb upstream 1649 true scaffold_7: 970899-972547 Eutrema salsugineum
Thhalv10012229m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 970899-971398 Eutrema salsugineum
Thhalv10012229m.g 0.5kb downstream 0.5kb downstream 1649 true scaffold_7: 971399-973047 Eutrema salsugineum
Thhalv10012229m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 972548-973047 Eutrema salsugineum
Thhalv10012229m.g 1.0kb upstream 1.0kb upstream 2149 true scaffold_7: 970399-972547 Eutrema salsugineum
Thhalv10012229m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 970399-971398 Eutrema salsugineum
Thhalv10012229m.g 1.0kb downstream 1.0kb downstream 2149 true scaffold_7: 971399-973547 Eutrema salsugineum
Thhalv10012229m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 972548-973547 Eutrema salsugineum
Thhalv10012229m.g 2.0kb upstream 2.0kb upstream 3149 true scaffold_7: 969399-972547 Eutrema salsugineum
Thhalv10012229m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 969399-971398 Eutrema salsugineum
Thhalv10012229m.g 2.0kb downstream 2.0kb downstream 3149 true scaffold_7: 971399-974547 Eutrema salsugineum
Thhalv10012229m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 972548-974547 Eutrema salsugineum
Thhalv10012229m.g 5.0kb upstream 5.0kb upstream 6149 true scaffold_7: 966399-972547 Eutrema salsugineum
Thhalv10012229m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 966399-971398 Eutrema salsugineum
Thhalv10012229m.g 5.0kb downstream 5.0kb downstream 6149 true scaffold_7: 971399-977547 Eutrema salsugineum
Thhalv10012229m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 972548-977547 Eutrema salsugineum
Thhalv10012229m.g 10.0kb upstream 10.0kb upstream 11149 true scaffold_7: 961399-972547 Eutrema salsugineum
Thhalv10012229m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 961399-971398 Eutrema salsugineum
Thhalv10012229m.g 10.0kb downstream 10.0kb downstream 11149 true scaffold_7: 971399-982547 Eutrema salsugineum
Thhalv10012229m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 972548-982547 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380442 5261 Brassicaceae View MSA
123838521 5264 Brassicales-Malvales View MSA
124322469 5266 SBM View MSA
124169151 5268 Malvidae View MSA
124074296 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain