Gene : Thecc1EG003127 T. cacao v1.1
Defline:  (1 of 6) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 Genomic Order:  2281
Name:  ? Thecc1EG003127 Secondary Identifier:  ? PAC:27434677
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003127 0.5kb upstream 0.5kb upstream 2865 true scaffold_1: 19468634-19471498 Theobroma cacao
Thecc1EG003127 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19468634-19469133 Theobroma cacao
Thecc1EG003127 0.5kb downstream 0.5kb downstream 2865 true scaffold_1: 19469134-19471998 Theobroma cacao
Thecc1EG003127 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19471499-19471998 Theobroma cacao
Thecc1EG003127 1.0kb upstream 1.0kb upstream 3365 true scaffold_1: 19468134-19471498 Theobroma cacao
Thecc1EG003127 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19468134-19469133 Theobroma cacao
Thecc1EG003127 1.0kb downstream 1.0kb downstream 3365 true scaffold_1: 19469134-19472498 Theobroma cacao
Thecc1EG003127 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19471499-19472498 Theobroma cacao
Thecc1EG003127 2.0kb upstream 2.0kb upstream 4365 true scaffold_1: 19467134-19471498 Theobroma cacao
Thecc1EG003127 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19467134-19469133 Theobroma cacao
Thecc1EG003127 2.0kb downstream 2.0kb downstream 4365 true scaffold_1: 19469134-19473498 Theobroma cacao
Thecc1EG003127 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19471499-19473498 Theobroma cacao
Thecc1EG003127 5.0kb upstream 5.0kb upstream 7365 true scaffold_1: 19464134-19471498 Theobroma cacao
Thecc1EG003127 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19464134-19469133 Theobroma cacao
Thecc1EG003127 5.0kb downstream 5.0kb downstream 7365 true scaffold_1: 19469134-19476498 Theobroma cacao
Thecc1EG003127 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19471499-19476498 Theobroma cacao
Thecc1EG003127 10.0kb upstream 10.0kb upstream 12365 true scaffold_1: 19459134-19471498 Theobroma cacao
Thecc1EG003127 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19459134-19469133 Theobroma cacao
Thecc1EG003127 10.0kb downstream 10.0kb downstream 12365 true scaffold_1: 19469134-19481498 Theobroma cacao
Thecc1EG003127 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19471499-19481498 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823657 5264 Brassicales-Malvales View MSA
124319727 5266 SBM View MSA
124168247 5268 Malvidae View MSA
124074296 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain