Gene : Cagra.1704s0004 C. grandiflora v1.1
Defline:  (1 of 5) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) Genomic Order:  4
Name:  ? Cagra.1704s0004 Secondary Identifier:  ? PAC:28903852
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1704s0004 0.5kb upstream 0.5kb upstream 2568 true Scaffold1704: 16861-19428 Capsella grandiflora
Cagra.1704s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1704: 16861-17360 Capsella grandiflora
Cagra.1704s0004 0.5kb downstream 0.5kb downstream 2568 true Scaffold1704: 17361-19928 Capsella grandiflora
Cagra.1704s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1704: 19429-19928 Capsella grandiflora
Cagra.1704s0004 1.0kb upstream 1.0kb upstream 3068 true Scaffold1704: 16361-19428 Capsella grandiflora
Cagra.1704s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1704: 16361-17360 Capsella grandiflora
Cagra.1704s0004 1.0kb downstream 1.0kb downstream 3068 true Scaffold1704: 17361-20428 Capsella grandiflora
Cagra.1704s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1704: 19429-20428 Capsella grandiflora
Cagra.1704s0004 2.0kb upstream 2.0kb upstream 4068 true Scaffold1704: 15361-19428 Capsella grandiflora
Cagra.1704s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1704: 15361-17360 Capsella grandiflora
Cagra.1704s0004 2.0kb downstream 2.0kb downstream 4068 true Scaffold1704: 17361-21428 Capsella grandiflora
Cagra.1704s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1704: 19429-21428 Capsella grandiflora
Cagra.1704s0004 5.0kb upstream 5.0kb upstream 7068 true Scaffold1704: 12361-19428 Capsella grandiflora
Cagra.1704s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1704: 12361-17360 Capsella grandiflora
Cagra.1704s0004 5.0kb downstream 5.0kb downstream 7068 true Scaffold1704: 17361-24428 Capsella grandiflora
Cagra.1704s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1704: 19429-24428 Capsella grandiflora
Cagra.1704s0004 10.0kb upstream 10.0kb upstream 12068 true Scaffold1704: 7361-19428 Capsella grandiflora
Cagra.1704s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1704: 7361-17360 Capsella grandiflora
Cagra.1704s0004 10.0kb downstream 10.0kb downstream 12068 true Scaffold1704: 17361-29428 Capsella grandiflora
Cagra.1704s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1704: 19429-29428 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370195 5261 Brassicaceae View MSA
123837145 5264 Brassicales-Malvales View MSA
124339653 5266 SBM View MSA
124250665 5268 Malvidae View MSA
124069927 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain