Gene : Cagra.2236s0035 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15241 - TRANSFORMER-2-RELATED Genomic Order:  35
Name:  ? Cagra.2236s0035 Secondary Identifier:  ? PAC:28906592
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2236s0035 0.5kb upstream 0.5kb upstream 2772 true Scaffold2236: 131972-134743 Capsella grandiflora
Cagra.2236s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold2236: 131972-132471 Capsella grandiflora
Cagra.2236s0035 0.5kb downstream 0.5kb downstream 2772 true Scaffold2236: 132472-135243 Capsella grandiflora
Cagra.2236s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold2236: 134744-135243 Capsella grandiflora
Cagra.2236s0035 1.0kb upstream 1.0kb upstream 3272 true Scaffold2236: 131472-134743 Capsella grandiflora
Cagra.2236s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold2236: 131472-132471 Capsella grandiflora
Cagra.2236s0035 1.0kb downstream 1.0kb downstream 3272 true Scaffold2236: 132472-135743 Capsella grandiflora
Cagra.2236s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold2236: 134744-135743 Capsella grandiflora
Cagra.2236s0035 2.0kb upstream 2.0kb upstream 4272 true Scaffold2236: 130472-134743 Capsella grandiflora
Cagra.2236s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold2236: 130472-132471 Capsella grandiflora
Cagra.2236s0035 2.0kb downstream 2.0kb downstream 4272 true Scaffold2236: 132472-136743 Capsella grandiflora
Cagra.2236s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold2236: 134744-136743 Capsella grandiflora
Cagra.2236s0035 5.0kb upstream 5.0kb upstream 7272 true Scaffold2236: 127472-134743 Capsella grandiflora
Cagra.2236s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold2236: 127472-132471 Capsella grandiflora
Cagra.2236s0035 5.0kb downstream 5.0kb downstream 7272 true Scaffold2236: 132472-139743 Capsella grandiflora
Cagra.2236s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold2236: 134744-139743 Capsella grandiflora
Cagra.2236s0035 10.0kb upstream 10.0kb upstream 12272 true Scaffold2236: 122472-134743 Capsella grandiflora
Cagra.2236s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold2236: 122472-132471 Capsella grandiflora
Cagra.2236s0035 10.0kb downstream 10.0kb downstream 12272 true Scaffold2236: 132472-144743 Capsella grandiflora
Cagra.2236s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold2236: 134744-144743 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378112 5261 Brassicaceae View MSA
123838522 5264 Brassicales-Malvales View MSA
124340248 5266 SBM View MSA
124245200 5268 Malvidae View MSA
124070278 5270 Rosid View MSA
123749009 5271 Pentapetalae View MSA
122794925 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain