Gene : Cagra.2515s0027 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT Genomic Order:  27
Name:  ? Cagra.2515s0027 Secondary Identifier:  ? PAC:28894405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0027 0.5kb upstream 0.5kb upstream 5527 true Scaffold2515: 84612-90138 Capsella grandiflora
Cagra.2515s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 84612-85111 Capsella grandiflora
Cagra.2515s0027 0.5kb downstream 0.5kb downstream 5527 true Scaffold2515: 85112-90638 Capsella grandiflora
Cagra.2515s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 90139-90638 Capsella grandiflora
Cagra.2515s0027 1.0kb upstream 1.0kb upstream 6027 true Scaffold2515: 84112-90138 Capsella grandiflora
Cagra.2515s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 84112-85111 Capsella grandiflora
Cagra.2515s0027 1.0kb downstream 1.0kb downstream 6027 true Scaffold2515: 85112-91138 Capsella grandiflora
Cagra.2515s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 90139-91138 Capsella grandiflora
Cagra.2515s0027 2.0kb upstream 2.0kb upstream 7027 true Scaffold2515: 83112-90138 Capsella grandiflora
Cagra.2515s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 83112-85111 Capsella grandiflora
Cagra.2515s0027 2.0kb downstream 2.0kb downstream 7027 true Scaffold2515: 85112-92138 Capsella grandiflora
Cagra.2515s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 90139-92138 Capsella grandiflora
Cagra.2515s0027 5.0kb upstream 5.0kb upstream 10027 true Scaffold2515: 80112-90138 Capsella grandiflora
Cagra.2515s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 80112-85111 Capsella grandiflora
Cagra.2515s0027 5.0kb downstream 5.0kb downstream 10027 true Scaffold2515: 85112-95138 Capsella grandiflora
Cagra.2515s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 90139-95138 Capsella grandiflora
Cagra.2515s0027 10.0kb upstream 10.0kb upstream 15027 true Scaffold2515: 75112-90138 Capsella grandiflora
Cagra.2515s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 75112-85111 Capsella grandiflora
Cagra.2515s0027 10.0kb downstream 10.0kb downstream 15027 true Scaffold2515: 85112-100138 Capsella grandiflora
Cagra.2515s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 90139-100138 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375475 5261 Brassicaceae View MSA
123840205 5264 Brassicales-Malvales View MSA
124338321 5266 SBM View MSA
124242857 5268 Malvidae View MSA
124069197 5270 Rosid View MSA
123746124 5271 Pentapetalae View MSA
122796668 5272 Eudicot View MSA
122049145 5273 Angiosperm View MSA
121351360 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain