Gene : Cagra.4093s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED Genomic Order:  2
Name:  ? Cagra.4093s0002 Secondary Identifier:  ? PAC:28897244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4093s0002 0.5kb upstream 0.5kb upstream 3247 true Scaffold4093: 366-3612 Capsella grandiflora
Cagra.4093s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4093: 366-865 Capsella grandiflora
Cagra.4093s0002 0.5kb downstream 0.5kb downstream 3247 true Scaffold4093: 866-4112 Capsella grandiflora
Cagra.4093s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4093: 3613-4112 Capsella grandiflora
Cagra.4093s0002 1.0kb upstream 1.0kb upstream 3612 true Scaffold4093: 1-3612 Capsella grandiflora
Cagra.4093s0002 1.0kb upstream 1.0kb upstream 865 false Scaffold4093: 1-865 Capsella grandiflora
Cagra.4093s0002 1.0kb downstream 1.0kb downstream 3747 true Scaffold4093: 866-4612 Capsella grandiflora
Cagra.4093s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4093: 3613-4612 Capsella grandiflora
Cagra.4093s0002 2.0kb upstream 2.0kb upstream 3612 true Scaffold4093: 1-3612 Capsella grandiflora
Cagra.4093s0002 2.0kb upstream 2.0kb upstream 865 false Scaffold4093: 1-865 Capsella grandiflora
Cagra.4093s0002 2.0kb downstream 2.0kb downstream 4747 true Scaffold4093: 866-5612 Capsella grandiflora
Cagra.4093s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4093: 3613-5612 Capsella grandiflora
Cagra.4093s0002 5.0kb upstream 5.0kb upstream 3612 true Scaffold4093: 1-3612 Capsella grandiflora
Cagra.4093s0002 5.0kb upstream 5.0kb upstream 865 false Scaffold4093: 1-865 Capsella grandiflora
Cagra.4093s0002 5.0kb downstream 5.0kb downstream 7747 true Scaffold4093: 866-8612 Capsella grandiflora
Cagra.4093s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4093: 3613-8612 Capsella grandiflora
Cagra.4093s0002 10.0kb upstream 10.0kb upstream 3612 true Scaffold4093: 1-3612 Capsella grandiflora
Cagra.4093s0002 10.0kb upstream 10.0kb upstream 865 false Scaffold4093: 1-865 Capsella grandiflora
Cagra.4093s0002 10.0kb downstream 10.0kb downstream 12747 true Scaffold4093: 866-13612 Capsella grandiflora
Cagra.4093s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4093: 3613-13612 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
122379543 5261 Brassicaceae View MSA
123833112 5264 Brassicales-Malvales View MSA
124342416 5266 SBM View MSA
124245209 5268 Malvidae View MSA
124064026 5270 Rosid View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain