Protein Family : RNA binding protein, putative, expressed 121349930

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  108

108 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29794.t000147 (1 of 2) K11090 - lupus La protein (LA, SSB) R. communis v0.1 3619   29794: 948357-951975
30146.t000154 (1 of 2) K11090 - lupus La protein (LA, SSB) R. communis v0.1 3532   30146: 1112539-1116070
Cucsa.161440 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. sativus v1.0 5207   scaffold01144: 1335232-1340438
orange1.1g043731m.g (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. sinensis v1.1 3157   scaffold00005: 556825-559981
AT4G32720 (1 of 2) K11090 - lupus La protein (LA, SSB) A. thaliana TAIR10 La1 2769   Chr4: 15787209-15789977
AT1G79880 (1 of 2) K11090 - lupus La protein (LA, SSB) A. thaliana TAIR10 2351   Chr1: 30046028-30048378
Thhalv10025209m.g (1 of 2) PTHR22792:SF64 - LA PROTEIN 1-RELATED E. salsugineum v1.0 2849   scaffold_1: 3090826-3093674
Thhalv10018639m.g (1 of 2) PTHR22792:SF64 - LA PROTEIN 1-RELATED E. salsugineum v1.0 2117   scaffold_9: 42456-44572
Ciclev10008260m.g (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. clementina v1.0 3487   scaffold_1: 2893291-2896777
Lus10038624.g (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED L. usitatissimum v1.0 2391   scaffold37: 854012-856402
Lus10022135.g (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED L. usitatissimum v1.0 2788   scaffold371: 667349-670136
Lus10011685.g (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED L. usitatissimum v1.0 6723   scaffold476: 113304-120026
Gorai.001G028400 (1 of 1) KOG4213 - RNA-binding protein La G. raimondii v2.1 2950   Chr01: 2665764-2668713
Gorai.002G178100 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. raimondii v2.1 2355   Chr02: 46041450-46043804
Gorai.009G050900 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. raimondii v2.1 3018   Chr09: 3673024-3676041
Gorai.011G131400 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. raimondii v2.1 2219   Chr11: 19868952-19871170
Thecc1EG047089 (1 of 1) K11090 - lupus La protein (LA, SSB) T. cacao v1.1 3039   scaffold_9: 2030331-2033369
Migut.A00234 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED M. guttatus v2.0 3829   scaffold_1: 1095965-1099793
Araha.4996s0011 (1 of 2) PTHR22792:SF64 - LA PROTEIN 1-RELATED A. halleri v1.1 2720   Scaffold4996: 42909-45628
Araha.20468s0002 (1 of 2) PTHR22792:SF64 - LA PROTEIN 1-RELATED A. halleri v1.1 2310   Scaffold20468: 3950-6259
Cagra.4093s0002 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. grandiflora v1.1 2747   Scaffold4093: 866-3612
Glyma.06G082200 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. max Wm82.a2.v1 3593   Chr06: 6323424-6327016
Glyma.17G190500 (1 of 1) KOG4213 - RNA-binding protein La G. max Wm82.a2.v1 8842   Chr17: 26714122-26722963
Glyma.04G080500 (1 of 1) PF05383//PF08777//PF14259 - La domain (La) // RNA binding motif (RRM_3) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) G. max Wm82.a2.v1 3842   Chr04: 6767313-6771154
Brara.G02012 (1 of 1) PF05383//PF08777//PF14259 - La domain (La) // RNA binding motif (RRM_3) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) B. rapa FPsc v1.3 2371   A07: 18108198-18110568
Brara.H01297 (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED B. rapa FPsc v1.3 2966   A08: 14139144-14142109
Brara.A00518 (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED B. rapa FPsc v1.3 2517   A01: 2549804-2552320
Bostr.7867s1123 (1 of 1) KOG4213 - RNA-binding protein La B. stricta v1.2 2807   Scaffold7867: 5707617-5710423
Bostr.20129s0526 (1 of 2) PTHR22792:SF64 - LA PROTEIN 1-RELATED B. stricta v1.2 2359   Scaffold20129: 2785610-2787968
Medtr1g026890 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED M. truncatula Mt4.0v1 5709   chr1: 8830191-8835899

108 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30146.m003577 R. communis v0.1 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
29794.m003448 R. communis v0.1 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Cucsa.161440.1 C. sativus v1.0 121349930 RNA binding protein, putative, expressed 1 5274 Embryophyte
orange1.1g043731m C. sinensis v1.1 121349930 RNA binding protein, putative, expressed 1 5274 Embryophyte
AT4G32720.1 A. thaliana TAIR10 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
AT1G79880.1 A. thaliana TAIR10 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Thhalv10018639m E. salsugineum v1.0 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Thhalv10025209m E. salsugineum v1.0 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Ciclev10008260m C. clementina v1.0 121349930 RNA binding protein, putative, expressed 1 5274 Embryophyte
Lus10022135 L. usitatissimum v1.0 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Lus10038624 L. usitatissimum v1.0 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Lus10011685 L. usitatissimum v1.0 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Gorai.001G028400.1 G. raimondii v2.1 121349930 RNA binding protein, putative, expressed 4 5274 Embryophyte
Gorai.002G178100.1 G. raimondii v2.1 121349930 RNA binding protein, putative, expressed 4 5274 Embryophyte
Gorai.009G050900.1 G. raimondii v2.1 121349930 RNA binding protein, putative, expressed 4 5274 Embryophyte
Gorai.011G131400.1 G. raimondii v2.1 121349930 RNA binding protein, putative, expressed 4 5274 Embryophyte
Thecc1EG047089t1 T. cacao v1.1 121349930 RNA binding protein, putative, expressed 1 5274 Embryophyte
Migut.A00234.1.p M. guttatus v2.0 121349930 RNA binding protein, putative, expressed 1 5274 Embryophyte
Araha.4996s0011.1.p A. halleri v1.1 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Araha.20468s0002.1.p A. halleri v1.1 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Cagra.4093s0002.1.p C. grandiflora v1.1 121349930 RNA binding protein, putative, expressed 1 5274 Embryophyte
Glyma.17G190500.1.p G. max Wm82.a2.v1 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Glyma.06G082200.1.p G. max Wm82.a2.v1 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Glyma.04G080500.1.p G. max Wm82.a2.v1 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Brara.H01297.1.p B. rapa FPsc v1.3 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Brara.G02012.1.p B. rapa FPsc v1.3 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Brara.A00518.1.p B. rapa FPsc v1.3 121349930 RNA binding protein, putative, expressed 3 5274 Embryophyte
Bostr.20129s0526.1.p B. stricta v1.2 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Bostr.7867s1123.1.p B. stricta v1.2 121349930 RNA binding protein, putative, expressed 2 5274 Embryophyte
Medtr1g026890.1 M. truncatula Mt4.0v1 121349930 RNA binding protein, putative, expressed 1 5274 Embryophyte