Gene : Thecc1EG047089 T. cacao v1.1
Defline:  (1 of 1) K11090 - lupus La protein (LA, SSB) Genomic Order:  380
Name:  ? Thecc1EG047089 Secondary Identifier:  ? PAC:27430954
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047089 0.5kb upstream 0.5kb upstream 3539 true scaffold_9: 2029831-2033369 Theobroma cacao
Thecc1EG047089 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2029831-2030330 Theobroma cacao
Thecc1EG047089 0.5kb downstream 0.5kb downstream 3539 true scaffold_9: 2030331-2033869 Theobroma cacao
Thecc1EG047089 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2033370-2033869 Theobroma cacao
Thecc1EG047089 1.0kb upstream 1.0kb upstream 4039 true scaffold_9: 2029331-2033369 Theobroma cacao
Thecc1EG047089 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2029331-2030330 Theobroma cacao
Thecc1EG047089 1.0kb downstream 1.0kb downstream 4039 true scaffold_9: 2030331-2034369 Theobroma cacao
Thecc1EG047089 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2033370-2034369 Theobroma cacao
Thecc1EG047089 2.0kb upstream 2.0kb upstream 5039 true scaffold_9: 2028331-2033369 Theobroma cacao
Thecc1EG047089 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2028331-2030330 Theobroma cacao
Thecc1EG047089 2.0kb downstream 2.0kb downstream 5039 true scaffold_9: 2030331-2035369 Theobroma cacao
Thecc1EG047089 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2033370-2035369 Theobroma cacao
Thecc1EG047089 5.0kb upstream 5.0kb upstream 8039 true scaffold_9: 2025331-2033369 Theobroma cacao
Thecc1EG047089 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2025331-2030330 Theobroma cacao
Thecc1EG047089 5.0kb downstream 5.0kb downstream 8039 true scaffold_9: 2030331-2038369 Theobroma cacao
Thecc1EG047089 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2033370-2038369 Theobroma cacao
Thecc1EG047089 10.0kb upstream 10.0kb upstream 13039 true scaffold_9: 2020331-2033369 Theobroma cacao
Thecc1EG047089 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2020331-2030330 Theobroma cacao
Thecc1EG047089 10.0kb downstream 10.0kb downstream 13039 true scaffold_9: 2030331-2043369 Theobroma cacao
Thecc1EG047089 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2033370-2043369 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
123833112 5264 Brassicales-Malvales View MSA
124342416 5266 SBM View MSA
124245209 5268 Malvidae View MSA
124064026 5270 Rosid View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain