Protein Family : RNA binding protein, putative, expressed 122041135

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  96

96 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29794.t000147 (1 of 2) K11090 - lupus La protein (LA, SSB) R. communis v0.1 3619   29794: 948357-951975
Cucsa.161440 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. sativus v1.0 5207   scaffold01144: 1335232-1340438
orange1.1g043731m.g (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. sinensis v1.1 3157   scaffold00005: 556825-559981
AT4G32720 (1 of 2) K11090 - lupus La protein (LA, SSB) A. thaliana TAIR10 La1 2769   Chr4: 15787209-15789977
Thhalv10025209m.g (1 of 2) PTHR22792:SF64 - LA PROTEIN 1-RELATED E. salsugineum v1.0 2849   scaffold_1: 3090826-3093674
Ciclev10008260m.g (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. clementina v1.0 3487   scaffold_1: 2893291-2896777
Lus10038624.g (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED L. usitatissimum v1.0 2391   scaffold37: 854012-856402
Lus10022135.g (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED L. usitatissimum v1.0 2788   scaffold371: 667349-670136
Lus10011685.g (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED L. usitatissimum v1.0 6723   scaffold476: 113304-120026
Gorai.001G028400 (1 of 1) KOG4213 - RNA-binding protein La G. raimondii v2.1 2950   Chr01: 2665764-2668713
Gorai.002G178100 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. raimondii v2.1 2355   Chr02: 46041450-46043804
Gorai.009G050900 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. raimondii v2.1 3018   Chr09: 3673024-3676041
Gorai.011G131400 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. raimondii v2.1 2219   Chr11: 19868952-19871170
Thecc1EG047089 (1 of 1) K11090 - lupus La protein (LA, SSB) T. cacao v1.1 3039   scaffold_9: 2030331-2033369
Migut.A00234 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED M. guttatus v2.0 3829   scaffold_1: 1095965-1099793
Araha.4996s0011 (1 of 2) PTHR22792:SF64 - LA PROTEIN 1-RELATED A. halleri v1.1 2720   Scaffold4996: 42909-45628
Cagra.4093s0002 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED C. grandiflora v1.1 2747   Scaffold4093: 866-3612
Glyma.06G082200 (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED G. max Wm82.a2.v1 3593   Chr06: 6323424-6327016
Glyma.17G190500 (1 of 1) KOG4213 - RNA-binding protein La G. max Wm82.a2.v1 8842   Chr17: 26714122-26722963
Glyma.04G080500 (1 of 1) PF05383//PF08777//PF14259 - La domain (La) // RNA binding motif (RRM_3) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) G. max Wm82.a2.v1 3842   Chr04: 6767313-6771154
Brara.H01297 (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED B. rapa FPsc v1.3 2966   A08: 14139144-14142109
Brara.A00518 (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED B. rapa FPsc v1.3 2517   A01: 2549804-2552320
Bostr.7867s1123 (1 of 1) KOG4213 - RNA-binding protein La B. stricta v1.2 2807   Scaffold7867: 5707617-5710423
Medtr1g026890 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED M. truncatula Mt4.0v1 5709   chr1: 8830191-8835899
SapurV1A.0446s0230 (1 of 1) K11090 - lupus La protein (LA, SSB) S. purpurea v1.0 4046   chr06: 23133794-23137839
evm_27.TU.AmTr_v1.0_scaffold00109.42 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED A. trichopoda v1.0 9596   AmTr_v1.0_scaffold00109: 559935-569530
Traes_2AL_120E7CB68 (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED T. aestivum v2.2 4085   ta_iwgsc_2al_v1_6030532: 3-4087
Traes_2BL_76D62F333 (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED T. aestivum v2.2 4155   ta_iwgsc_2bl_v1_6883788: 75-4229
Traes_2DL_1ABBF70E5 (1 of 3) PTHR22792:SF64 - LA PROTEIN 1-RELATED T. aestivum v2.2 4381   ta_iwgsc_2dl_v1_9908732: 1566-5946
Eucgr.C01584 (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED E. grandis v2.0 6362   Chr03: 26131976-26138337

96 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Migut.A00234.1.p M. guttatus v2.0 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
AL7G19020.t1 A. lyrata v2.1 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA20718 T. pratense v2 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
DCAR_003047 D. carota v2.0 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm
DCAR_007706 D. carota v2.0 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm
Solyc08g068310.2.1 S. lycopersicum ITAG2.4 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Araha.4996s0011.1.p A. halleri v1.1 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
AUR62009326-RA C. quinoa v1.0 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm
AUR62023013-RA C. quinoa v1.0 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm
Cagra.4093s0002.1.p C. grandiflora v1.1 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Glyma.17G190500.1.p G. max Wm82.a2.v1 122041135 RNA binding protein, putative, expressed 3 5273 Angiosperm
Glyma.04G080500.1.p G. max Wm82.a2.v1 122041135 RNA binding protein, putative, expressed 3 5273 Angiosperm
Glyma.06G082200.1.p G. max Wm82.a2.v1 122041135 RNA binding protein, putative, expressed 3 5273 Angiosperm
Brara.A00518.1.p B. rapa FPsc v1.3 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm
Brara.H01297.1.p B. rapa FPsc v1.3 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm
Bostr.7867s1123.1.p B. stricta v1.2 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
orange1.1g043731m C. sinensis v1.1 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Medtr1g026890.1 M. truncatula Mt4.0v1 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
SapurV1A.0446s0230.1.p S. purpurea v1.0 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00109.42 A. trichopoda v1.0 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
AT4G32720.1 A. thaliana TAIR10 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Traes_2DL_1ABBF70E5.1 T. aestivum v2.2 122041135 RNA binding protein, putative, expressed 3 5273 Angiosperm
Traes_2AL_120E7CB68.1 T. aestivum v2.2 122041135 RNA binding protein, putative, expressed 3 5273 Angiosperm
Traes_2BL_76D62F333.1 T. aestivum v2.2 122041135 RNA binding protein, putative, expressed 3 5273 Angiosperm
Eucgr.C01584.1.p E. grandis v2.0 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Prupe.1G452100.1.p P. persica v2.1 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Thhalv10025209m E. salsugineum v1.0 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
GSMUA_Achr7P02670_001 M. acuminata v1 122041135 RNA binding protein, putative, expressed 1 5273 Angiosperm
Manes.07G099900.1.p M. esculenta v6.1 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm
Manes.03G063200.1.p M. esculenta v6.1 122041135 RNA binding protein, putative, expressed 2 5273 Angiosperm