Gene : Glyma.17G190500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4213 - RNA-binding protein La Genomic Order:  1905
Name:  ? Glyma.17G190500 Secondary Identifier:  ? PAC:30480043
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G190500 0.5kb upstream 0.5kb upstream 9342   true Chr17: 26713622-26722963 Glycine max
Glyma.17G190500 0.5kb upstream 0.5kb upstream 500   false Chr17: 26713622-26714121 Glycine max
Glyma.17G190500 0.5kb downstream 0.5kb downstream 9342   true Chr17: 26714122-26723463 Glycine max
Glyma.17G190500 0.5kb downstream 0.5kb downstream 500   false Chr17: 26722964-26723463 Glycine max
Glyma.17G190500 1.0kb upstream 1.0kb upstream 9842   true Chr17: 26713122-26722963 Glycine max
Glyma.17G190500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 26713122-26714121 Glycine max
Glyma.17G190500 1.0kb downstream 1.0kb downstream 9842   true Chr17: 26714122-26723963 Glycine max
Glyma.17G190500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 26722964-26723963 Glycine max
Glyma.17G190500 2.0kb upstream 2.0kb upstream 10842   true Chr17: 26712122-26722963 Glycine max
Glyma.17G190500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 26712122-26714121 Glycine max
Glyma.17G190500 2.0kb downstream 2.0kb downstream 10842   true Chr17: 26714122-26724963 Glycine max
Glyma.17G190500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 26722964-26724963 Glycine max
Glyma.17G190500 5.0kb upstream 5.0kb upstream 13842   true Chr17: 26709122-26722963 Glycine max
Glyma.17G190500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 26709122-26714121 Glycine max
Glyma.17G190500 5.0kb downstream 5.0kb downstream 13842   true Chr17: 26714122-26727963 Glycine max
Glyma.17G190500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 26722964-26727963 Glycine max
Glyma.17G190500 10.0kb upstream 10.0kb upstream 18842   true Chr17: 26704122-26722963 Glycine max
Glyma.17G190500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 26704122-26714121 Glycine max
Glyma.17G190500 10.0kb downstream 10.0kb downstream 18842   true Chr17: 26714122-26732963 Glycine max
Glyma.17G190500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 26722964-26732963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
122309017 5265 Fabidae View MSA
124064026 5270 Rosid View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.51317 0.0 14.8125    
cufflinks 5.61611 0.0 18.7942   High
cufflinks 2.27612 0.0 11.0981   Low
cufflinks 4.58564 0.0 16.0052    
cufflinks 5.30691 0.0 22.4792   High
cufflinks 3.1236 0.0 13.285    
cufflinks 4.93093 0.0 17.1413    
cufflinks 2.95843 0.0 13.2083    
cufflinks 3.94096 0.0 15.6569    
cufflinks 0.363        
cufflinks 0.158       Low
cufflinks 0.755       High
cufflinks 0.916       High
cufflinks 1.298       High
cufflinks 0.16       Low
cufflinks 0.314        
cufflinks 0.388        
cufflinks 0.673        
cufflinks 0.772       High
cufflinks 0.248        
cufflinks 0.241        
cufflinks 0.315        
cufflinks 0.503        
cufflinks 0.196       Low
cufflinks 0.242        
cufflinks 0.307        

0 Strain